Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00274 ATGCCCAATTCTGAACCCAACACCATCACTGGAACTGCTGGCTATGTCCTTCATGATGTCCCTCATCTATCTCACTACATCCCTCACCTCACTACATATCCTAATCCGTTGCAAGGCAACCCTTCCTATTCAGTTGTCAATCAGCATTTTGTTGATATGGATGATTCTGTTGCGCAACAGATAATTGTACACAAGAATAGCCCAAGAGGGACTCATTTTCGCCGTGCCGGGCCTCGTCAGAAGGTATATTTTGACTCCGAGGATGTCCATGCTTGTATTGTCACATGTGGAGGTCTTTGTCCTGGTGTAAATACAGTGATCAGAGAAATAGTTTGCGGATTGCACCATATGTATGGGGTGAACGAAGTCCTGGGAATAGAGGGAGGATATAGTGGTTTTTATTCACGAAATACAATTCCGTTGACACCAAAGGATGTCAATGACATTCACAAACGTGGTGGAACCATCCTTGGTACCTCACAAGGAGAAGGAGGCAATGATACCGGAAAGATAGTGGATAGCATTCAGGATAGGGGAATTAATCAGGTTTACATACTTGGAGGAGATGGAACTCAGAGAGGGGCTTCTGTGATTTTTGAGGAAATTAGAAGACGTGGCTTGAAAGTTTCAGTGGTGGGGATTCCGGAATCTGTTGATAATGACATCCCAGTTATTGACAAATCATTGGGTTTTGACACTGCTGTTGAAGAGGCACAAAGAGCCATAAATGCTGCTCATGTGGAAGCAGAAAGTACTGAGAATGGTATTGGTGTTGTCAAGCTAATGGGTCGCTTCAGTGGATTTATAGCTATGTACGCAACTCTCGCCAGCCGAGATGTGGATTGTTGCTTAATTCCAGAGTCACCCTTTTACCTTGAGGGTCCATGTGGACTCTTTGAGTTCATTAGGAAAAGACTCACAGAAAATGGCCACATGGTTATAGTAATAGCTGAAGGTGCTGGTCAGGAGCTTATTTCGGAAAGCCTATCTGCTATGAATAAGCAGGATTCAGCCGGCAACAAGTTACTTCAAGATGTTGGTTTGTGGTTATCCCAGAAGATTAAGGACCACTTTGCGGAAAGTAAAAAAATGGCTATAACTCTGAAGTACATTGATCCCACGTACATGGTCCGTGCCGTTCCAAGTATTGCATCTGATAATGTATATTGCACTCTCCTTGCTCAAAGTGCTGTTCATGGTGCAATGGCTGGATACACAGGCTTCACAGTTGGCGTGGTCAATGGCAGACATTCTTATATTCCATTTTATCGGATAAATGAGGGTGAAAAGAAGGTTGTGATAACTGATCGCATGTGGGCAAGGTTACTGTCTTCAACTAATCAACCTAGCTTCTTGAATCCTAAAGGAACACAACTCACCAAACCATAG 1389 0.4356 MPNSEPNTITGTAGYVLHDVPHLSHYIPHLTTYPNPLQGNPSYSVVNQHFVDMDDSVAQQIIVHKNSPRGTHFRRAGPRQKVYFDSEDVHACIVTCGGLCPGVNTVIREIVCGLHHMYGVNEVLGIEGGYSGFYSRNTIPLTPKDVNDIHKRGGTILGTSQGEGGNDTGKIVDSIQDRGINQVYILGGDGTQRGASVIFEEIRRRGLKVSVVGIPESVDNDIPVIDKSLGFDTAVEEAQRAINAAHVEAESTENGIGVVKLMGRFSGFIAMYATLASRDVDCCLIPESPFYLEGPCGLFEFIRKRLTENGHMVIVIAEGAGQELISESLSAMNKQDSAGNKLLQDVGLWLSQKIKDHFAESKKMAITLKYIDPTYMVRAVPSIASDNVYCTLLAQSAVHGAMAGYTGFTVGVVNGRHSYIPFYRINEGEKKVVITDRMWARLLSSTNQPSFLNPKGTQLTKP 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00274 462 PIRSF ATP_PFK_TP0108 3 456 IPR012004 GO:0003872|GO:0005524|GO:0006096
Cca11g00274 462 Pfam Phosphofructokinase 92 399 IPR000023 GO:0003872|GO:0006096
Cca11g00274 462 PANTHER ATP-DEPENDENT 6-PHOSPHOFRUCTOKINASE 3 456 - -
Cca11g00274 462 PANTHER - 3 456 - -
Cca11g00274 462 PRINTS ATP-dependent phosphofructokinase family signature 93 112 IPR022953 GO:0003872|GO:0006002|GO:0006096
Cca11g00274 462 PRINTS ATP-dependent phosphofructokinase family signature 179 195 IPR022953 GO:0003872|GO:0006002|GO:0006096
Cca11g00274 462 PRINTS ATP-dependent phosphofructokinase family signature 212 229 IPR022953 GO:0003872|GO:0006002|GO:0006096
Cca11g00274 462 PRINTS ATP-dependent phosphofructokinase family signature 230 248 IPR022953 GO:0003872|GO:0006002|GO:0006096
Cca11g00274 462 PRINTS ATP-dependent phosphofructokinase family signature 251 267 IPR022953 GO:0003872|GO:0006002|GO:0006096
Cca11g00274 462 PRINTS ATP-dependent phosphofructokinase family signature 308 320 IPR022953 GO:0003872|GO:0006002|GO:0006096
Cca11g00274 462 Gene3D - 85 277 - -
Cca11g00274 462 SUPERFAMILY Phosphofructokinase 24 452 IPR035966 GO:0003872|GO:0006096
Cca11g00274 462 Hamap ATP-dependent 6-phosphofructokinase [pfkA]. 20 452 IPR012004 GO:0003872|GO:0005524|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00274 Cca-Chr11 3429946 3434153 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00274 K00850 - gmx:100796614 826.624
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00225 10 2394853 2399419 Cca11g00274 11 3429946 3434153 PCT