Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00257 ATGCCGGAAATCACCGTCGATTTCCGCGCTCCGCCGCCCTCTCCGGTCGCCTCCGGCAGGAGATCCACCGTCACCAACGACGACGTCCTCACCGAGTTTCTCGAGGCCTCGCTCCGCGTCCCCGATCTCGTGCTGCCGGACAAGATCTTCCCCAAGCAGAGGCACCTCCACGCGCCTCCGGAGGTCGATTTCGTCGCGCTGTGCTTCCACCGCGACCGCGCCCTCCGCGACGTCGTTTCCGACTCGCTAGCCGGAATCGGATGCTTCCAGCTTCTCAACCACGGCATTCCGCCGCAGCTCATGGAGGAGGCCGCCGAGGCTGCCGCCGGGGTATTCCGAGTGCCGCCGGCGAGGCGTGCTGCCGCCACGAGGTCGCCGGAGAAGCCCTGGGGATTCGAGGAGTACCACGCCGGTGAGGAGGAGAAGGAAGAAGGTAGCGAGGAATTCGTGTGGTGCAATGACGACGACTTCAAGTCCAAAATGGCGGGAATTTGGTCAACTGGATATCCAAATTTCAGTGAGAAGATGGAAAAAGTGATGTCACGCATAGAGATGGTGGCTATGAAAATGTTGCCTGTGATATTGAAAAACGGGATTACAGATACAGAATTTGTGGGTGGGAATACTTGCTGCGTTTACAAGCATCGCAGAGATAATAGCGATCGATGGGCTAACTCTCTGAAATACGACGTCATTAGAATGCTGATCAGAGGAACAGATTACTCCCATTCATTGTGCTTCCATGTTTGCAATGCCTCTTCACAGTTTCATCTTTACTCCAAGAAAAGTTGGCTCTCTTTTTGCCCTCACCAAGGTGCCCTTATAGTCACTGCTGGAGATCAAACCCAGATATTGAGTGGTGGACAGTACAAGCAGGTGATTGGAAGGCCAATCTTTAAAGGAGACAAAGAAGAGAGCATTTCAATGGCTTTCCTCTATTCTACCCAAAACACCAACAAGTACAATTTTCAAACAAGTATGGGAACAAGAACTATTTCACTTGCCCACCAACTCATCTTGGCTTTAATTCTCACCCTTGTCTACCATCTCATCATTTTTGCCTACAAAAAACTTCATTAA 1080 0.5185 MPEITVDFRAPPPSPVASGRRSTVTNDDVLTEFLEASLRVPDLVLPDKIFPKQRHLHAPPEVDFVALCFHRDRALRDVVSDSLAGIGCFQLLNHGIPPQLMEEAAEAAAGVFRVPPARRAAATRSPEKPWGFEEYHAGEEEKEEGSEEFVWCNDDDFKSKMAGIWSTGYPNFSEKMEKVMSRIEMVAMKMLPVILKNGITDTEFVGGNTCCVYKHRRDNSDRWANSLKYDVIRMLIRGTDYSHSLCFHVCNASSQFHLYSKKSWLSFCPHQGALIVTAGDQTQILSGGQYKQVIGRPIFKGDKEESISMAFLYSTQNTNKYNFQTSMGTRTISLAHQLILALILTLVYHLIIFAYKKLH 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00257 359 Gene3D - 60 331 IPR027443 -
Cca11g00257 359 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 5 358 - -
Cca11g00257 359 PANTHER - 5 358 - -
Cca11g00257 359 MobiDBLite consensus disorder prediction 1 22 - -
Cca11g00257 359 SUPERFAMILY Clavaminate synthase-like 50 316 - -
Cca11g00257 359 Pfam non-haem dioxygenase in morphine synthesis N-terminal 73 148 IPR026992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00257 Cca-Chr11 3118911 3121494 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00257 - - gmx:100799796 532.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00257 11 3118911 3121494 Cca11g00257 11 3118911 3121494 ECH
Cca10g00213 10 2229031 2231659 Cca11g00257 11 3118911 3121494 PCT