Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00251 ATGGCACCTCATGGTGAGTCTTTGTCAAGCTCTTTCTCTAGGAACAACAACATATCAAAGCCTCCGAAGCTCTCATCCGACAACCTTCAAAGAACTATTTCTGACATCTCCTTTGAATTGGCAAAAGAAGAGATCGATGATTTGAAGCTGCCAGCGATATCTGAGGTGGAGAATGCCAAGTGTGAGTGCTGTGGCATGTGTGAGGAGTGCACGCCCGAGTACATAGAGCGCGTGCGTGACAAGTTCAACGGGAAGTGGGTGTGCGGGTTGTGTGCTGAGGCTGTGAAGGAAGAGTTGGAGAAAAATGGAGGGAAGAAAGATGAGGCCTTGGGTGCACACATGAGTGCGTGTGTTAGGTTCAACAAATATGGAAGGGCTTTCCCTGTTCTGTTTCAGGCTCAAGCCATGAAAGAGATGCTGAAAAAGAACACCATAGATGGAAGAATAAGGGCTAAGTCCATTAGCCCTAGGGACAAAGTTGCAGGGCCAAAGAAAGGAGGGATTGCTCGTAGCTCCAGTTGCATTCCAGCTATCACAAGAGAGATCAATGATATCAAAATCGCCAATTGA 570 0.4719 MAPHGESLSSSFSRNNNISKPPKLSSDNLQRTISDISFELAKEEIDDLKLPAISEVENAKCECCGMCEECTPEYIERVRDKFNGKWVCGLCAEAVKEELEKNGGKKDEALGAHMSACVRFNKYGRAFPVLFQAQAMKEMLKKNTIDGRIRAKSISPRDKVAGPKKGGIARSSSCIPAITREINDIKIAN 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00251 189 PANTHER OS01G0745000 PROTEIN 1 186 IPR012876 -
Cca11g00251 189 Pfam Protein of unknown function (DUF1677) 56 142 IPR012876 -
Cca11g00251 189 PANTHER CASP-LIKE PROTEIN (DUF1677) 1 186 - -
Cca11g00251 189 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00251 Cca-Chr11 3055161 3055730 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00251 - - gmx:100526996 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00251 11 3055161 3055730 Cca11g00251 11 3055161 3055730 ECH
Cca10g00211 10 2214617 2215714 Cca11g00251 11 3055161 3055730 PCT