Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00211 ATGGCACCCCATGGAGAGTGTTTGCCAAGGaacaacaacaacaacaacattaacaagaaGATGTCGAAACCTCCAAGGATTGATCACATTCAAAGAACAATCTCAGACATATCGTTTGAGCTAACGAAGGAAGGGATTGATTTGTCACTTGCACCAATAACTGAGGTTATGGAAGCCAAGTGTGAGTGCTGTGGAATGAGTGAAGAGTGCACGCCAGAGTACGTGGAGCGTGTGCGTGACAAGTTCTTGGGGAAGTGGGTGTGTGGTTTGTGTGCTGAGGCAGTGAAGGAAGAGTTGGAGAAAAATGGAGGGAAGAAGGAAGAGGCATTGAGTTCACACATGAGTGCGTGTGTTAGGTTCAACAAATATGGAAGGGCCTTCCCGGTTCTGTTCCAAGCTGAGGCCATGAAGGAGATGCTGAAAAAGAACAAAATGGAAGGGAGAAGGACCAAGTCTTTCAACACAAAGGATCAAAAGAAAGGAGGGATTGCAAGGAGTTCAAGTTGCATTCCAGCAATTACAAGAGAGATTAATGGTCTCATCTCACATTAG 552 0.4366 MAPHGECLPRNNNNNNINKKMSKPPRIDHIQRTISDISFELTKEGIDLSLAPITEVMEAKCECCGMSEECTPEYVERVRDKFLGKWVCGLCAEAVKEELEKNGGKKEEALSSHMSACVRFNKYGRAFPVLFQAEAMKEMLKKNKMEGRRTKSFNTKDQKKGGIARSSSCIPAITREINGLISH 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00211 183 Pfam Protein of unknown function (DUF1677) 56 142 IPR012876 -
Cca10g00211 183 MobiDBLite consensus disorder prediction 1 23 - -
Cca10g00211 183 PANTHER CASP-LIKE PROTEIN (DUF1677) 18 180 - -
Cca10g00211 183 PANTHER OS01G0745000 PROTEIN 18 180 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00211 Cca-Chr10 2214617 2215714 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00211 - - gmx:100785884 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00211 10 2214617 2215714 Cca10g00211 10 2214617 2215714 ECH
Cca10g00211 10 2214617 2215714 Cca11g00251 11 3055161 3055730 PCT