Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00236 ATGGAGAGGGAGGTAGAGCTTTGTCCACTTCAACCCAAAATGGCTTCCCACATTACTTCTCATCCCCAAAGCTGTGCTAAGGGTGGCCTCCTTACCATGCCTTTCATCATAGCAAATGAAGCACTTGCTAGGGTGGCAACTTTGGGGCTTCTGCCCAATATGATACTGTACTTGATGGGGAACTACAATCTTCATCTACCCAAAGCTACCAAGATACTGCTCTTATCTGTTGCAACTACCAATTTCATGCCTCTCCCTGGTGCCTTCATTGCTGATTCTTATTTGGGTCGCTTCCTTGCTGTTGCTTTAGGTTCCTTCATCACTTTCCTGGGAATGGCACTCTTGTGGCTAACAGCCATGATCCCACAGGCACGGCCTCCTCCTTGCAATTCTGAAACTGAAAGATGTGAATCAGCAACAGCTGGGCAAATGGCAATGTTAATCTCTTCCCTTGCTCTCATGTCCATTGGAAATGGTGGCCTTTCATGTTCCCTGGCATTTGGTGCAGACCAGGTGAATAGGAAAGATAACCCCAATAATCAAAGGACCTTGGAGATATTCTTCAGCTGGTACTATGCTTCCTCTGCCATATCAGTCATAATTGCCTTCACCGGAATAGTATATATTCAAGATCATCTTGGATGGAAATTGGGTTTTGGAGTTCCTGCAGCTCTTATGTTCTTTTCCACTTTTTTCTTCCTTCTGGCTTCTCCGCTTTATGTAAAGAATAAAACACACAGCAGCTTGCTCACTGGATTTGCTCGTGTGATTGTTGTAGCCTATAAGAACAGGAAACTTACATTACCACATAAGATCTCGGATGGAATGTATCATCATAACAAAGACTCTGATCTAGTTGTTCCAAATGATAAACTAAGGTTTCTGAATAAAGCTTGCTTCATTAAGGACCCAGAAAAGGAGATAGCCTCTGATGGTTCAGCCTCAAATCCATGGAGTCTCTGCACAGTTGATCAAGTAGAAGAACTAAAAGCTATTGTTAAAGTTATTCCCCTGTGGTCTACAGGGATCATGATGTTTCTTAACATTGGAGGCTCCTTTGGATTGCTTCAAGCTAAATCCCTTAACAGACATATTACTCCAAATTTCGAAGTTCCAGCAGGTTCTTTAAGTGTGATCATGATATTTACAATATTTATATGGATAGCTCTTTATGACCGTGTCATTATTCCTCTAGCCTCAAAGCTCAGAGGCAAACCAGTTAGGATCAGTGCCAAGAGAAGAATGGGACTTGGGTTGTTTTTCTCTTTTCTCCACTTGGTAACTGCAGCAATTGTTGAGACTACAAGGCGAAGGAGAGCAATTAGTGAGGGCCATATTAATGACACACATGCTGTGTTGAATATGTCTGCAATGTGGCTTTTTCCTCAGCTTTGCTTGGGTGGCATAGCTGAAGCATTCAATGCAATAGGCCAAAATGAGTTCTATTATACCGAGTTTCCAAAGACTATGTCAAGCATTGCTTCTTCCCTTTTTGGACTGGGAATGGCATTTGGGTATGTGTTGTCTTCTTTGGTATTCAGTTTTGTGGAAAAGGTTAGTTCAAGAGGGGGAAAAGATGGATGGGTTTCAGATAACATTAACAAGGGTCGTTTTGACAAGTACTATTGGCTTCTTGCCACACTCAGTGTTGTTAATATACTGTATTATCTAGTATGCAGCTGGGCTTATGGACCTACTGTTGATCAGGAATCAAAGGTAACTGAAGAAAATGGTTCGAATGAGGAAGAATTACCATTAATTGAATCGAGGATtagggttgttcatagatcagatgtttcaaaaatccaaactgaaccgaagggatctattttataa 1836 0.4041 MEREVELCPLQPKMASHITSHPQSCAKGGLLTMPFIIANEALARVATLGLLPNMILYLMGNYNLHLPKATKILLLSVATTNFMPLPGAFIADSYLGRFLAVALGSFITFLGMALLWLTAMIPQARPPPCNSETERCESATAGQMAMLISSLALMSIGNGGLSCSLAFGADQVNRKDNPNNQRTLEIFFSWYYASSAISVIIAFTGIVYIQDHLGWKLGFGVPAALMFFSTFFFLLASPLYVKNKTHSSLLTGFARVIVVAYKNRKLTLPHKISDGMYHHNKDSDLVVPNDKLRFLNKACFIKDPEKEIASDGSASNPWSLCTVDQVEELKAIVKVIPLWSTGIMMFLNIGGSFGLLQAKSLNRHITPNFEVPAGSLSVIMIFTIFIWIALYDRVIIPLASKLRGKPVRISAKRRMGLGLFFSFLHLVTAAIVETTRRRRAISEGHINDTHAVLNMSAMWLFPQLCLGGIAEAFNAIGQNEFYYTEFPKTMSSIASSLFGLGMAFGYVLSSLVFSFVEKVSSRGGKDGWVSDNINKGRFDKYYWLLATLSVVNILYYLVCSWAYGPTVDQESKVTEENGSNEEELPLIESRIRVVHRSDVSKIQTEPKGSIL 611
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00236 611 Pfam POT family 99 529 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca11g00236 611 SUPERFAMILY MFS general substrate transporter 49 560 IPR036259 -
Cca11g00236 611 ProSitePatterns PTR2 family proton/oligopeptide symporters signature 1. 87 111 IPR018456 GO:0006857|GO:0016020|GO:0022857
Cca11g00236 611 Gene3D MFS general substrate transporter like domains 11 571 IPR036259 -
Cca11g00236 611 CDD MFS_NPF1_2 33 563 - -
Cca11g00236 611 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 21 582 IPR000109 GO:0016020|GO:0022857|GO:0055085
Cca11g00236 611 PANTHER PEPTIDE/NITRATE TRANSPORTER 21 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00236 Cca-Chr11 2836044 2839508 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00236 9 602 Organic Solute Cotransporters AT1G52190 55.814 0.0 696
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00236 - K14638 gmx:100804235 1089.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00192 10 2042403 2045721 Cca11g00236 11 2836044 2839508 PCT