Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00182 aTGGACGCCGTTGTTCAAACCAGAGGCCTTCTCTCTCTCCCCACCAACCCCAGAAACAGGGTTTTGCACGCACCACACGCCCTCAAACACCGTTTCCTCTCTCTCAAACCCAAACCCCTCTCTCTCAAACCCCTCGCCGCCAATCCACTGTCTCTCCCACCAAAACCTAACCCCTTCGGCCCAAAGCCCAAATCTTTGTTCCTCTGCCGGgccgaggccgccgccgccgccgATGGGCCCGCCTTGGACGACGCCGAGAAGCCCAAGCTCCTGGGAATCGAAATCACCACGCTCAAGAAAATCATCCCCTTGGGCATGATGTTCTTCTGCATCCTCTTCAATTACACCATTCTCCGTGACACCAAGGACGTTCTCGTCGTCACGGCGCGTGGGAGCAGCGCGGAGATTATTCCCTTTCTCAAAACCTGGGTGAATCTTCCCATGGCCGTTGGGTTCATGCTTCTCTACACCAAGTTGGCCAATGTTTTGTCAAAGCAAGCTCTTTTCTACTCTGTCATTCTTCCATTCATCGCTTTCTTTGGGGCTTTTGGCTTCGTTTTGTACCCTCTCAGCAACTATATTCACCCTGAGGCCTTTGCCGACAAGCTTCTCAACATCCTCGGACCCAGGTTCCTTGGCCCCCTCGCGATCATGAGGATTTGGAGCTTTTGTTTGTTCTATGTCATGGCTGAGTTGTGGGGGAGTGTCGTCATTTCTGTTCTCTTTTGGGGTTTTGCCAATCAGATAACTACCGTTGATGAAGCAAAACGATTCTACCCACTGTTTGGACTTGGGGCCAATGTAGCCCTTGTGTTCTCTGGCCGGACAGTGAAATACTTTTCTAATCTGAGGCAGAATTTAGGTCCTGGAGTTGATGGTTGGGCCATCTCTCTAAAAGCAATGATGAGCATAGTCGTGGGTATGGGGTTGGCAATCTGTTTCCTGTACTGGTGGGTGAATAATTATGTTCCTCTTCCTACACGTAGCAAGAAGAAGAAGGAGAAGCCCAAGATGGGAACCATGGAGAGCTTGAAGTTCTTGGTGTCTTCAAAATACATCAGAGATCTTGCCACTTTAGTTGTTGCTTACGGAATCAGCATCAATCTTGTCGAGGTTACTTGGAAGTCTAAGCTCAAAGCTCAGTTTCCAAGCCCCAATGAGTACTCATCTTTTATGGGTGACTTCTCAACTGCAACTGGAATTGCCACGTTCACAATGATGCTTGTCAGCCAATTTATATTTGACAAATATGGATGGGGAGTTGCTGCCACGATCACCCCCACGGTCCTGCTTTTGACAGGAGTCGGTTTCTTTTCTCTTCTATTGTTTGGGGCCCCTCTTGCACCTAGTCTTGCGCAGTTTGGAATGACTCCACTACTAGCAGCTGTATACGTGGGTGCCCTGCAGAACATATTTAGCAAGAGTGCCAAGTACAGCTTATTTGATCCCTGCAAAGAAATGGCCTACATTCCATTGGATGAGGATACCAAGGTTAAAGGGAAGGCAGCCATTGATGTTGTGTGCAACCCATTGGGGAAATCTGGAGGTGCCCTTATTCAGCAATTTATGATCTTAACTTTTGGGTCACTAGCTAATTCAACCCCATACTTGGGAGGAGTGCTTCTGCTGATTGTTACTGCTTGGCTAGCAGCAGCCAAATCCTTGGATACCCAGTTTACTGCATTGCGAAAAGAGGAAGAACTTGAGAAAGAAATGGAAAGAGCAGCTGCTGTTAAGATACCTGTAGTGGCTGAGAATGAGGGTGGAAATGGTTCTCTTGCACCATTAAATCCAGCCTCAGGTGACTCCTCAAGTAGTCCATCTGAAGCCTCATCTCCTCGCAATGTTTAA 1851 0.4749 MDAVVQTRGLLSLPTNPRNRVLHAPHALKHRFLSLKPKPLSLKPLAANPLSLPPKPNPFGPKPKSLFLCRAEAAAAADGPALDDAEKPKLLGIEITTLKKIIPLGMMFFCILFNYTILRDTKDVLVVTARGSSAEIIPFLKTWVNLPMAVGFMLLYTKLANVLSKQALFYSVILPFIAFFGAFGFVLYPLSNYIHPEAFADKLLNILGPRFLGPLAIMRIWSFCLFYVMAELWGSVVISVLFWGFANQITTVDEAKRFYPLFGLGANVALVFSGRTVKYFSNLRQNLGPGVDGWAISLKAMMSIVVGMGLAICFLYWWVNNYVPLPTRSKKKKEKPKMGTMESLKFLVSSKYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIATFTMMLVSQFIFDKYGWGVAATITPTVLLLTGVGFFSLLLFGAPLAPSLAQFGMTPLLAAVYVGALQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGVLLLIVTAWLAAAKSLDTQFTALRKEEELEKEMERAAAVKIPVVAENEGGNGSLAPLNPASGDSSSSPSEASSPRNV 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00182 616 PANTHER - 1 616 IPR004667 GO:0005471|GO:0006862|GO:0016021
Cca11g00182 616 TIGRFAM AAA: ADP/ATP carrier protein family 93 559 IPR004667 GO:0005471|GO:0006862|GO:0016021
Cca11g00182 616 PANTHER ADP,ATP CARRIER PROTEIN 1 616 - -
Cca11g00182 616 MobiDBLite consensus disorder prediction 586 616 - -
Cca11g00182 616 Pfam TLC ATP/ADP transporter 89 559 IPR004667 GO:0005471|GO:0006862|GO:0016021
Cca11g00182 616 MobiDBLite consensus disorder prediction 596 616 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00182 Cca-Chr11 2231643 2235408 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca11g00182 1 594 Organic Solute Cotransporters AT1G80300 78.956 0.0 937
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00182 K03301 - gmx:100793284 1048.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g00182 11 2231643 2235408 Cca11g00182 11 2231643 2235408 ECH
Cca10g00130 10 1312091 1316009 Cca11g00182 11 2231643 2235408 PCT