Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00130 ATGGATGTTCTTCTTCAAACCAGAGGCCTTCTCTCTCTCCCCACAAACCCCAGAAACAGGGTCACACTCTCACACCCCTCTCTCACCTTAAAGCACAGATTTTTCTCTCCAAACCCAAAAACCCTCCCCGTCCCTTCTCTTTCTTCCAATGGCTTCCCAAAATTCTCAAAACTCAATGTCTTTCCCCAAAAGGAGAAAACTTTGTTCCTGTGCAAGGCTGAGGCCGCTGCTGCTGCAGCATTTGGGGAACCGGAAAGTGAACAACCAAAGTTTTTGGGCGTTGAAGTTGCAACCTTGAAGAAGATTCTGCCTCTGGGGTTGATGTTTTTTTGCATTCTCTTCAACTACACCATTCTGAGGGACACCAAGGATGTGTTGGTTGTGACAGCCAGAGGAAGCAGTGCGGAGATTATACCGTTTCTGAAAACTTGGGTGAACCTTCCCATGGCCATTGGGTTCATGTTGTTGTACACAAAGTTGGCTAATGTGTTGTCCAAGCAAGCTCTTTTTTACTCTGTTATTCTTCCCTTCATTGCCTTCTTTGGAGCCTTTGGATTTGTTTTGTATCCTCTCAGCAACTATATCCACCCCGAGGCGTTTGCGGATAAACTTCTCAACGTTCTTGGCCCGAGGTTCCTTGGTCCTCTTGCAATTATGAGAATATGGAGCTTCTGTTTGTTCTATGTCATGGCTGAATTGTGGGGGAGTGTTGTCATTTCCGTTCTCTTTTGGGGGTTCGCCAATCAGATAACTAGCGTTGAGGAAGCAAAACGATTCTATCCTCTATTTGGACTTGGGGCCAATGTAGCCCTCGTGTTCTCTGGTCGGACAGTGAAATACTTTTCTAATCTGAGGCAGAATTTAGGTCCTGGAGTTGATGGCTGGGCCATCTCTCTAAAAGGAATGATGAGCATAGTTGTGGGCATGGGATTTGCAATCTGTTTCCTGTATTGGTGGGTCAATAGTTATGTTCCTCTGCCTACACGAAGCAAGAAGAAGAAGGAGAAGCCCAAAATGGGAACAATGGAGAGCATAAAGTTCTTGGTGTCTTCAAAATATATAAGGGATCTTGCCACTTTGGTGGTTGCATATGGAATCAGCATTAATCTTGTTGAGGTTACATGGAAATCAAAGCTCAAAGCTCAGTTTCCTAGCCCAAACGAGTACTCATCTTTTATGGGCGACTTCTCAACTGCAACTGGCATTGCTACATTCACAATGATGCTTCTAAGCCAAGTTATATTTGACAAATATGGATGGGGAGTTGCTGCCAAGATCACCCCCACTGTCCTGCTTTTGACAGGAGTTGGTTTCTTTTCTCTCATATTATTTGGCGGCCCAATTGCTCCTGTTATTGCGAAGTTTGGAATGACACCACTGCTAGCAGCTGTATATGTGGGTGCCATGCAAAACATATTCAGCAAGAGTGCTAAGTACAGTTTATTCGATCCATGCAAAGAGATGGCCTACATACCCTTGGATGAGGATACCAAGGTCAAGGGGAAGGCAGCCATTGATGTTGTGTGCAACCCATTGGGGAAGTCTGGAGGTGCTTTGATTCAGCAGTTCATGATCTTAACTTTTGGTTCACTGGCTAATTCAACTCCATACCTGGGAGGGGTCCTTCTGGTGATTGTTCTTGCCTGGTTATCAGCTGCCAAGTCGCTGGATACGCAGTTTACTGCCTTGCGCCAAGAAGAAGAGCTTGAGAAAGAGATGGAGAGAGCAGCTGCTGTCAAGATACCAGTGGTGGCCAAGAGCGAAGATGGAAATGGTTCTCTTTCAAGTGTTCCACTGTTAAATCCAACAACTGGTGGTGACTCCTCAAGTAGTCCCTCTGAAGCCTCAACTCCTCGCAATATCTAA 1866 0.4555 MDVLLQTRGLLSLPTNPRNRVTLSHPSLTLKHRFFSPNPKTLPVPSLSSNGFPKFSKLNVFPQKEKTLFLCKAEAAAAAAFGEPESEQPKFLGVEVATLKKILPLGLMFFCILFNYTILRDTKDVLVVTARGSSAEIIPFLKTWVNLPMAIGFMLLYTKLANVLSKQALFYSVILPFIAFFGAFGFVLYPLSNYIHPEAFADKLLNVLGPRFLGPLAIMRIWSFCLFYVMAELWGSVVISVLFWGFANQITSVEEAKRFYPLFGLGANVALVFSGRTVKYFSNLRQNLGPGVDGWAISLKGMMSIVVGMGFAICFLYWWVNSYVPLPTRSKKKKEKPKMGTMESIKFLVSSKYIRDLATLVVAYGISINLVEVTWKSKLKAQFPSPNEYSSFMGDFSTATGIATFTMMLLSQVIFDKYGWGVAAKITPTVLLLTGVGFFSLILFGGPIAPVIAKFGMTPLLAAVYVGAMQNIFSKSAKYSLFDPCKEMAYIPLDEDTKVKGKAAIDVVCNPLGKSGGALIQQFMILTFGSLANSTPYLGGVLLVIVLAWLSAAKSLDTQFTALRQEEELEKEMERAAAVKIPVVAKSEDGNGSLSSVPLLNPTTGGDSSSSPSEASTPRNI 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00130 621 TIGRFAM AAA: ADP/ATP carrier protein family 94 560 IPR004667 GO:0005471|GO:0006862|GO:0016021
Cca10g00130 621 MobiDBLite consensus disorder prediction 589 621 - -
Cca10g00130 621 PANTHER - 1 620 IPR004667 GO:0005471|GO:0006862|GO:0016021
Cca10g00130 621 Pfam TLC ATP/ADP transporter 90 560 IPR004667 GO:0005471|GO:0006862|GO:0016021
Cca10g00130 621 PANTHER ADP,ATP CARRIER PROTEIN 1 620 - -
Cca10g00130 621 SUPERFAMILY MFS general substrate transporter 217 551 IPR036259 -
Cca10g00130 621 MobiDBLite consensus disorder prediction 588 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00130 Cca-Chr10 1312091 1316009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00130 1 594 Organic Solute Cotransporters AT1G80300 80.263 0.0 954
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00130 K03301 - gmx:100778352 1083.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00130 10 1312091 1316009 Cca10g00130 10 1312091 1316009 ECH
Cca10g00130 10 1312091 1316009 Cca11g00182 11 2231643 2235408 PCT