Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00160 ATGGCTTCCATTTCCCAAGGTCTCGTCTTCACCACTGCCATGCTCTTCTCCTCCACCCTCCTTTACTTTGCATTCTCTAGGCAAAACACTTCCCCCCACTCCAACAAACAACTCCTTCGTTCTTGCATATACTCAGAGGAGAAGAAAAGGGAGAGGAGGGGGAAGAAGAAAGTGAAATTTGCGGAAAATGTGATGGTAAAGGAAGAAGAAACTGATTGTAACGATGGAAACAGAGAAAAACAGGGGAAGCGAAACAGAGTATCGAGGAGCGAGTGCATTAATGAAGTTGCCGAAAATCGTGAAATGCCAGCCAACCGAGTTGCTCTGTATAATGGGATTTTGAGAGATAGGGTGCAGAGGATGGCGTGCTGTCACTGA 378 0.463 MASISQGLVFTTAMLFSSTLLYFAFSRQNTSPHSNKQLLRSCIYSEEKKRERRGKKKVKFAENVMVKEEETDCNDGNREKQGKRNRVSRSECINEVAENREMPANRVALYNGILRDRVQRMACCH 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00160 125 PANTHER TRANSMEMBRANE PROTEIN 2 124 - -
Cca11g00160 125 MobiDBLite consensus disorder prediction 69 90 - -
Cca11g00160 125 PANTHER PROTEIN, PUTATIVE-RELATED 2 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00160 Cca-Chr11 1942998 1943748 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00160 - - gmx:100786942 168.703
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00098 10 1025604 1026921 Cca11g00160 11 1942998 1943748 PCT