Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00098 ATGACTTCTATCATCTCACAAGGTCTTGTTCTCACCACTGCCATGCTTCTCTCAACAACTCTGTTTTATGTTGCCTTCTCTTGGCACAAGGCCACCCCATCATCATTTCAAATTCACCATCCTAACAAACCCACCTTACGCTCTTGCTTGTATTCAGaggaaaagaaaagggagagaaagaagaagaagaaAGTAAAATTTGCAGAAAATGTGAAGGATGGAAGAGAAAGGAATGAGGAAAAGAGAGTATCAAGGAACTGCAGGCATGAAACATCGGAAAGCAGTGGCATGCAAGCGAACAGAATGGCTTTGTATAACGGGATTTTGAGAGACCGTGTGCATAGAATGGAGTGTTCATACTAA 363 0.3857 MTSIISQGLVLTTAMLLSTTLFYVAFSWHKATPSSFQIHHPNKPTLRSCLYSEEKKRERKKKKKVKFAENVKDGRERNEEKRVSRNCRHETSESSGMQANRMALYNGILRDRVHRMECSY 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00098 120 MobiDBLite consensus disorder prediction 57 96 - -
Cca10g00098 120 PANTHER TRANSMEMBRANE PROTEIN 3 120 - -
Cca10g00098 120 PANTHER PROTEIN, PUTATIVE-RELATED 3 120 - -
Cca10g00098 120 MobiDBLite consensus disorder prediction 67 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00098 Cca-Chr10 1025604 1026921 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00098 - - gmx:100306632 137.887
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00098 10 1025604 1026921 Cca11g00160 11 1942998 1943748 PCT