Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca11g00159 ATGCAGAGAGAAGAAGAGGACGACGACGAACAAGAATCCAAGAGCAATCCCATCTGTGTGAACTTTGCACATCAGAAGGGAGGGCTATCAAACTCAAAGGATTGCTGTGGAATCGGTTTCGTCTTCTTCGTTTTTCTGCGAATTCCTCGTGACAGATCTAATCTAATCGAGTTTTTGGGGGTGTTTCAGACATTGCATGCATATGGGAGCAGTGGTTGTGTTGGATGCTGTAAAAGACCTACATTGAGTACTACAGTAGATGCGCCATCAAAAGAGGTGGCAACACAAGGTATCACAGTGAGGAAACCTAGTTCATCAGAGGATTTCTGGACCACAAGCACGCATGATATGGACAACAGTGCTGTCCAGTCACAGGGGAGCATCTCTTCAGCCAGTCTAACAAACCAAGCTGTGGTTCCTCATGTTGGTTCTTCCAAAACCAGTACCAACCCCACTGAATTTGTAAATCACGGCTTAATTCTTTGGAATCAGACTCGGCAACGTTGGGTCGGAAATAAGAAGCCTGAGAACCGAACACAACAACAACAATTACGAGAACCTAAATTGAGTTGGAATGCAACATATGAAAGTTTACTTGGGAGCAATAAGCCATTCCGTCAGCCTATCCCTCTTGCTGAAATGGTAGACTTTCTTGTGGACATCTGGGAGCAGGATGGCCTATATGACTGA 690 0.4507 MQREEEDDDEQESKSNPICVNFAHQKGGLSNSKDCCGIGFVFFVFLRIPRDRSNLIEFLGVFQTLHAYGSSGCVGCCKRPTLSTTVDAPSKEVATQGITVRKPSSSEDFWTTSTHDMDNSAVQSQGSISSASLTNQAVVPHVGSSKTSTNPTEFVNHGLILWNQTRQRWVGNKKPENRTQQQQLREPKLSWNATYESLLGSNKPFRQPIPLAEMVDFLVDIWEQDGLYD 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca11g00159 229 PANTHER DUF4050 FAMILY PROTEIN 66 229 - -
Cca11g00159 229 PANTHER OS07G0479600 PROTEIN 66 229 - -
Cca11g00159 229 Pfam Protein of unknown function (DUF4050) 113 183 IPR025124 -
Cca11g00159 229 Pfam Protein of unknown function (DUF4050) 188 229 IPR025124 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca11g00159 Cca-Chr11 1933415 1937752 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca11g00159 - - gmx:547651 288.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g02175 11 47633310 47636621 Cca11g00159 11 1933415 1937752 ECH
Cca11g00159 11 1933415 1937752 Cca11g00159 11 1933415 1937752 ECH