Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00932 ATGGGTTTCTTGTTACCAACCCTCTTCCTTTTTGTGTTCTCCCTCCAAACAAAGGCTGAGGAATTTGACTCCTTCTTCAATGCAAACATTTCCAGTTTCAGCAGTGGCAGAAAACTGGCAGGAAGATGCAATTTTTTCCGTGGGAAATGGGTGTATGACCCTTCATACCCTCTCTATGACCCCTCTACATGTCCCTTCATAGATCCACAATTCAACTGCCAAAAGTACGGTCGCCCTGACAAACAGTACCAGAAATATAGGTGGCAACCCTTCTCTTGTCCTTTACCAAGGTTCAATGCGTTTGATTTCCTGGCCAAGTATAGGAACAAGAAAATCATGTTTGTTGGTGACTCCTTGAGCTTAAACCAGTTCAACTCACTCGCTTGTATGATCCACTCTTGGGTGCCAAAAACTAGAACCTCTTTTATAAAGCAAGATGCTCTCTCCAAAATCACATTCCAGGACTATGGGCTTGAATTATTTCTATACCGCACACCATACTTGGTGGACCTTGATCGTGAGAGCGTTGGAAGGGTTCTGAAGATTGACTCAATAAAGAGTGGTGACGCATGGAGAGGGATGGACGTGCTAGTTTTCAACACGTGGCACTGGTGGACCCACACCGGGAGCTCACAGCCGTAG 642 0.4548 MGFLLPTLFLFVFSLQTKAEEFDSFFNANISSFSSGRKLAGRCNFFRGKWVYDPSYPLYDPSTCPFIDPQFNCQKYGRPDKQYQKYRWQPFSCPLPRFNAFDFLAKYRNKKIMFVGDSLSLNQFNSLACMIHSWVPKTRTSFIKQDALSKITFQDYGLELFLYRTPYLVDLDRESVGRVLKIDSIKSGDAWRGMDVLVFNTWHWWTHTGSSQP 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00932 213 Pfam PMR5 N terminal Domain 42 93 IPR025846 -
Cca10g00932 213 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 95 209 IPR026057 GO:0016740
Cca10g00932 213 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 8 212 IPR029962 GO:0016413
Cca10g00932 213 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 8 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00932 Cca-Chr10 10774004 10777725 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00932 - - gmx:100797993 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00932 10 10774004 10777725 Cca04g01193 04 13821320 13826779 PCT