Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01193 ATGGGTTCGCCATTGCTACACTCTCTCTTCTTCACTCTGTTTCTGCTCTGCCTCTCAACCAAAGCAGAGGATTTTGGTGCAACACAGAACCTCAAAGGAACATGCAACTTTTTCCGTGGAAAATGGGTCTATGATGCTTCCTACCCTCTCTATGACCCTTCTACTTGTCCCTTCATAGATCCACAGTTCAATTGCCAAAAACATGGTCGACCAGATAAAATGTATCAAAACTATAGGTGGATGCCATTTTCTTGTCCCATGCCAAGATTCAATGGATTGAACTTCTTGGAGAGATATAGAGGGAAGAAGATTATGTTTGTGGGTGACTCATTGAGCTTGAACCAGTTTAATTCATTGGCATGTATGATTCATGCTTGGGTGCCAAAGTCTAGGAGCACATTCAGACAGAGGGATGCTCTCTCCTCAGTCACATTTGAGGATTATGGGCTTGAGATATATTTGTACCGTACAGCATACTTGGTGGATCTTGAACGTGAGAAAGTTGGACGAGTTTTGAAGCTCGACTCTATCAAGAACGGTGACTCTTGGAATGGGATGGACGTTCTGATCTTTAACACGTGGCACTGGTGGACCCACACCGGAAATGCACAACCGTGGGACTATGTTCAGATGAATAATAAGTTGTACAAAGATATGAACCGTTTTATTGCATACTATAAAGGGCTAACAACATGGGCAAAGTGGGTTGAACGAAACGTGAATCCAGGGAAAACTAAGGTCTTCTTTTTGGGAATTTCTCCTGTGCATTACCAGGGGAAAGATTGGAATCAACCAACAAAGTCATGTATGGGTGAGAAACAACCATTCTTTGGATTGAAGTATCCTGCAGGGACACCAATGGCTTGGGTGGTGGTGAAGAAGGTGTTGAACAAGATAACAAAGCCAGTGTATTTCTTGGATGTGACCACACTCTCACAGTACAGAAAAGATGCACATCCTGAAGGATATAGTGGGGTTATGGCAACAGATTGTAGCCATTGGTGTCTTCCAGGCCTTCCTGACACTTGGAATGAGCTTCTCAATGCAGCTCTTTCTGCTTGA 1062 0.435 MGSPLLHSLFFTLFLLCLSTKAEDFGATQNLKGTCNFFRGKWVYDASYPLYDPSTCPFIDPQFNCQKHGRPDKMYQNYRWMPFSCPMPRFNGLNFLERYRGKKIMFVGDSLSLNQFNSLACMIHAWVPKSRSTFRQRDALSSVTFEDYGLEIYLYRTAYLVDLEREKVGRVLKLDSIKNGDSWNGMDVLIFNTWHWWTHTGNAQPWDYVQMNNKLYKDMNRFIAYYKGLTTWAKWVERNVNPGKTKVFFLGISPVHYQGKDWNQPTKSCMGEKQPFFGLKYPAGTPMAWVVVKKVLNKITKPVYFLDVTTLSQYRKDAHPEGYSGVMATDCSHWCLPGLPDTWNELLNAALSA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01193 353 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 5 352 - -
Cca04g01193 353 Pfam PMR5 N terminal Domain 34 85 IPR025846 -
Cca04g01193 353 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 87 349 IPR026057 GO:0016740
Cca04g01193 353 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 5 352 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01193 Cca-Chr4 13821320 13826779 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01193 - - gmx:100786668 681.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01193 04 13821320 13826779 Cca04g01193 04 13821320 13826779 ECH
Cca10g00932 10 10774004 10777725 Cca04g01193 04 13821320 13826779 PCT