Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00931 ATGGCGTCTGAACAATTGGTTCGCAGAGAAAACACCACCACCACGGACGACAAAGTCCGGGTTCCCAAGATGGCCACCCGCTTTGAAAACCTTACCGGTGGGAATGACACTCCACAGGGTAGCATGGAAGCGTTACAAGGTGGAGAGCTTAACAAAGAGCATGAAGGGAAATCCATTGGTGATGTTGGTGGACGTGGGAAAGCGAGGGAGAGCCATGAACTGGGTTCACACTTCGAATCCCTCGCTGACAAAGTGACGGGTGAAGATCACAAAGAGAGGGTAAGTGACCATGCATCGAATGTAGCTGGAAACAAAGAGGGTGAAGGAATCGCGAGAGAAAGACCTGCTCGTAATGTTGGAAAGTTCGACATGGAAAAGGAAGGTGGAGAAAGAGAGAAAGAACTGCAGAGACAAACGAGAGTGGTGAAAGGAAGAATGGAGAAAGAAAGAGGAAGAGAAAATGAAGGGAAAATAGTGGTAGAAAAAGGAAGAGTTGGTGCTGAAAATGAAGGTGCAGGTGGAACCGCTGTTATAACAAGCACATTGGAAAAAGGTGGTGATACTGAGAAACCAAGAGAAGAGAACGAAGGTATTGATGAAGCTGATCAGAAGAGTGCGAAGGAGACACTGAAAAACAACACATCATCACAAACTGAACCAAATGCGAAGGACGTGACCTTGGAAAAAGGTCAACAAGGCTACATTGCTGCGGCCAAAGACAGCATCACGAGTGCGGTGGAAAAAGCTGCGCCGGTGGCGCAGAAGGCGAAAGGGTACACGCTTCAAGCGGCGGAGAAGGCCAAGTGTGCGGGATGCACGACGGCGAGTTACGTGGGGGAGAAAGCGGTGGAGGGTGGGAAGACAGCGGCGGAGTATGCCGGAAAGGTTGCAGTGGATTTGAAGGACAAGGCCGTGGTGGCGGGGTGGGCCGCGGCCCATTTCTCGACGGAGAAGACGGTGGAGGGGACGAAGGCGGCGGCCCATGTGATGGAGGGAGCGGCGGGATATGCGGGACAGAAGGCCGCCGATCTGGCTTCGAAGTCGGCGGGTGCTGTTAAAGGGTTGGCTGCTTCTGCTGGTGAGACTGCTAAGGATTACACTGCAAGGAAGAAAGAGGAGGCAAAGCGGGAATTGGAGGCCAAGAAAGCATTACAATCTCAGGAAGCGAAAGGTATTGGCGAAACTGTGAGCGAGCATGCGCAAGAAGCGAAGCCAAGTGGAGGAGCCTCTCAGCAAGAGGGAACAGGAAGCAACGTGTTGAATGCAATAGGCGAAACTGTGAGCAGTGTTGGGGAGAAGGTGAAGAAACCGTTTGAAAACATGATGGGAGGAGGAGAAGGAAAAACGGAAAGTGGAGGGCAAGAGCAGAAAAAGAGTGTCATTGGTGAAACCGCGTCTGAGATTGGACAGAACATTATGAAACCAGCTGAGAGAGTTCAGGAGCATGGTCAAGAGGCAAAGCAAGAGGATGGGGTGTTGAGTGCCATTGGTGAAACCATCGCTGAGATTGCTGAAACAGCTAGAGTCATGGTTGGTGGTGAGGGAGAAAAAGAGTTGAAGCAGAACGTGGGATCAGACACTCGCGTAACTGATGATGCCAAACATGAAGGCTCACAGAGTGCTCGAGTTTAA 1632 0.5129 MASEQLVRRENTTTTDDKVRVPKMATRFENLTGGNDTPQGSMEALQGGELNKEHEGKSIGDVGGRGKARESHELGSHFESLADKVTGEDHKERVSDHASNVAGNKEGEGIARERPARNVGKFDMEKEGGEREKELQRQTRVVKGRMEKERGRENEGKIVVEKGRVGAENEGAGGTAVITSTLEKGGDTEKPREENEGIDEADQKSAKETLKNNTSSQTEPNAKDVTLEKGQQGYIAAAKDSITSAVEKAAPVAQKAKGYTLQAAEKAKCAGCTTASYVGEKAVEGGKTAAEYAGKVAVDLKDKAVVAGWAAAHFSTEKTVEGTKAAAHVMEGAAGYAGQKAADLASKSAGAVKGLAASAGETAKDYTARKKEEAKRELEAKKALQSQEAKGIGETVSEHAQEAKPSGGASQQEGTGSNVLNAIGETVSSVGEKVKKPFENMMGGGEGKTESGGQEQKKSVIGETASEIGQNIMKPAERVQEHGQEAKQEDGVLSAIGETIAEIAETARVMVGGEGEKELKQNVGSDTRVTDDAKHEGSQSARV 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00931 543 MobiDBLite consensus disorder prediction 107 164 - -
Cca10g00931 543 MobiDBLite consensus disorder prediction 366 459 - -
Cca10g00931 543 MobiDBLite consensus disorder prediction 48 99 - -
Cca10g00931 543 MobiDBLite consensus disorder prediction 208 225 - -
Cca10g00931 543 MobiDBLite consensus disorder prediction 404 425 - -
Cca10g00931 543 MobiDBLite consensus disorder prediction 1 228 - -
Cca10g00931 543 MobiDBLite consensus disorder prediction 185 207 - -
Cca10g00931 543 PANTHER - 1 538 - -
Cca10g00931 543 MobiDBLite consensus disorder prediction 512 543 - -
Cca10g00931 543 PANTHER LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN 1 538 - -
Cca10g00931 543 MobiDBLite consensus disorder prediction 366 384 - -
Cca10g00931 543 MobiDBLite consensus disorder prediction 30 44 - -
Cca10g00931 543 Coils Coil 368 388 - -
Cca10g00931 543 MobiDBLite consensus disorder prediction 10 24 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00931 - - ccaj:109810369 1017.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00931 10 10771055 10773426 Cca10g00931 10 10771055 10773426 ECH
Cca10g00931 10 10771055 10773426 Cca04g01195 04 13850913 13854452 PCT