Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01195 ATGGCTTCTCAGCAAATGCCTCGCACAGAAAACAGCAACCGTGAGAAAGGTGGTGGTGAGGAACAAGGAGGAAGAAAAGAAGAAAATAAACAATCTACCCTAGAAAACATTTCCAAGCCCAGAGCTGAAGCTCAACAAAAAGGAATGAGTGCAATTGAAGGTGCTAAGGAGAGATACGAAAGAGAAAAACAAGCTGCAAGTGAAGCTTCCAAAGAGAGAAACTTGAAGGCAAATGAGGAGTCAACACAGGCAAAAGACAAAATGGCTGAAGAAAGAACAAGAGAGGTAGTGGGAAGAGAGTGGAACAAAGAGGATAAACAAAGAAACAGTCCAAGAGGAAAAGTAGAGGCAGAGAAAGCAAGACCATTGGAAAAAACAAAAGAGGAAGCTAAAGAAACCAAAGAGggaggaggggaggaacatggaagaggaagagaagaaacaggagaagAAAATAAACAACCTAGCCTGGAAGAGATCTCCAAGTACAGAGCTGAAGCTCAACAAAAAGCAATGAATGCAATTGAAGGTGCTAAGGAGAGATATGAGAGAGAAAAACTAGCTGCAAACGAAGCTTCCAAAGAGAGAAACTTGAAGGAAAATGTGGAGAAACCACAGGCAAAAGACAAAAAGGCTGAAACCAAAGAGGGTGGTGCTGAGGAACAGAGAAGAGAAGAAAAAGAACAATCTAGCCTGGAAGAGATTTCCAAGTACAGAGCTGAAGCTCAACAAAAATCAATCAATGCGATTGAAGATGCTAAGGAGAGATATGAGAGAGAAAAACAAGCAGCAAGTGAAGCTTCTTCCAAAGAGAGAAACATGCATGCAAATGAGGAGGCAACACAACAGGCAAAAGATGTCACAATAGACAAGGGTCAACAAGGCAATCCTGAAGCAGAAGATGAGAAGGGTTATGGTGCAACAAAGGACACCATTGGTACTGTGCACCACACCACACCACTTGCTGAGAAGGCCAAGGCTGCAGGTGACACCGCTTCTCAGTATCTTGGAGATAAAGCAACTCAAGCCAAAGATGCTACTCTTGAAACTGGCAAGAGTGCTGCCAAAGTGGTTGAAGATTTGAAGGACAAGGCTGTGGTGACAGGATCGAGTGTTGCACATTATTCTGCTGAGATGACTGTGGAGGGAATTAATGTTGTTAAGGAAGCAGCTGAGTATGCAGCTGAGAAGGTTTCTGAGCTTGCAGCCATGTCAGTGGATACTGCTAAAGGTTTAGTTGCTGCAGCTGGTGAGAATGCCAAAGAGTATGCAGAGAGGGATTTGGAGGCCACAAGAGAAGCTCAAAATCAGGAATCTGAGGAGATGCCATTAGCAAAAGCCACCACTGAAAGCTTTCGAAGAGGACAATGGCAACAAGAACATGATCAAGGAGGAAAAAGGGAACATGGCTCCATTGGCCAAACTGTAGCTAAAGTTCCACAAAGGACTACAAAGCCACATGAAAGCAACACTTTTGAGGGAAACCAAGGTGAGGGGGTTGGGGACACAATAAGCACTGGTGAAAGTGAAAGGAAAGAGAAAGCACTTGGAGACATCATTGGAGAAGGCTTTCAAGGAAAAGGAAGTGGAGGAGATGTGAACACAAGCATTGGTGAAAAACTAGGCAGTGCAGCACAGATAATAAAGAAGCCACTGGACAAAGCCACTGAGGGAGGAAGAGAGGTGTTAGGAGCTGTAGGTGAAACTGTGGTTGAGATTGGAGAAAACATGGTGAAACCAGCACAGAAAGTGCAGCATCAGGGTGAAGGAGTTTTGAATGCCATAGGTGAGACCATAGCAGAAATAGCAGAGACAACTAGAGTGATTGTTGCTGGAGAGGGAGAAAAAGAACCACACGAGTATGATAGTGGGAAACATGAAAACTTGAAACTTGATTAG 1899 0.4281 MASQQMPRTENSNREKGGGEEQGGRKEENKQSTLENISKPRAEAQQKGMSAIEGAKERYEREKQAASEASKERNLKANEESTQAKDKMAEERTREVVGREWNKEDKQRNSPRGKVEAEKARPLEKTKEEAKETKEGGGEEHGRGREETGEENKQPSLEEISKYRAEAQQKAMNAIEGAKERYEREKLAANEASKERNLKENVEKPQAKDKKAETKEGGAEEQRREEKEQSSLEEISKYRAEAQQKSINAIEDAKERYEREKQAASEASSKERNMHANEEATQQAKDVTIDKGQQGNPEAEDEKGYGATKDTIGTVHHTTPLAEKAKAAGDTASQYLGDKATQAKDATLETGKSAAKVVEDLKDKAVVTGSSVAHYSAEMTVEGINVVKEAAEYAAEKVSELAAMSVDTAKGLVAAAGENAKEYAERDLEATREAQNQESEEMPLAKATTESFRRGQWQQEHDQGGKREHGSIGQTVAKVPQRTTKPHESNTFEGNQGEGVGDTISTGESERKEKALGDIIGEGFQGKGSGGDVNTSIGEKLGSAAQIIKKPLDKATEGGREVLGAVGETVVEIGENMVKPAQKVQHQGEGVLNAIGETIAEIAETTRVIVAGEGEKEPHEYDSGKHENLKLD 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01195 632 MobiDBLite consensus disorder prediction 611 632 - -
Cca04g01195 632 MobiDBLite consensus disorder prediction 476 503 - -
Cca04g01195 632 Coils Coil 240 274 - -
Cca04g01195 632 MobiDBLite consensus disorder prediction 1 330 - -
Cca04g01195 632 Coils Coil 49 72 - -
Cca04g01195 632 MobiDBLite consensus disorder prediction 424 511 - -
Cca04g01195 632 PANTHER - 115 223 - -
Cca04g01195 632 PANTHER - 1 137 - -
Cca04g01195 632 PANTHER - 213 624 - -
Cca04g01195 632 MobiDBLite consensus disorder prediction 176 240 - -
Cca04g01195 632 PANTHER LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN 1 137 - -
Cca04g01195 632 PANTHER LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN 115 223 - -
Cca04g01195 632 PANTHER LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN 213 624 - -
Cca04g01195 632 MobiDBLite consensus disorder prediction 53 165 - -
Cca04g01195 632 MobiDBLite consensus disorder prediction 13 34 - -
Cca04g01195 632 MobiDBLite consensus disorder prediction 248 279 - -
Cca04g01195 632 Coils Coil 165 195 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01195 - - ccaj:109798350 1137.09
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00931 10 10771055 10773426 Cca04g01195 04 13850913 13854452 PCT