Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00844 ATGATTTTTAATAAAGGGTCAATTCGTTCTAACCTTGACTGTTTCGTACGATGTACCACACCTGTGGTTCAATCCCAGTTTCTTCCTAAGTCCGAGATTACAAGCCTTAACCGCTTGTGGCATCCGTGGGAGAGAGAAACCGTAGAATATTTCACGTTGGGGGATCTTTGGAATTGCTATGATGAATGGAGTGCTTATGGAGCAGGAGTTCCCATCACCTTGACAAGTGGAGAGACACTTGTGCAGTACTACGTGCCTTATCTCTCTGCAATTCAGATTTTCACTAGCAATAGTTTCAGGGAAGAGACTGAGTCAGGTGACTGTGAGACAAGGGATTCCTATAGTGATTCTTTCAGCGAAGAGAGTGAGTGTGACAAGCTATGGAGGTGGGATGGAACTTCTTCAGAAGAAGGAGGGTCTGAGCAAGACTCTCTCTGGCATTTCAATGACAGATTAGGTCACCTCTATTGCCAGTATTTTGAAAGAGCAACTCCATATGGAAGAGTTCCTCTCATGGATAAGATTACTGGATTAGCTCAAAGATACCCAGGGTTGATGTCATTGAGAAGTGTTGATCTTTCACCAGCAAGTTGGATGGCCGTTGCGTGGTACCCAATTTATCATATCCCCATGGGAAGAACAATCAAAGACCTTTCTACTTGCTTTCTCACTTATCACACGCTTTCATCTTCATTTCAAGGGATGGACCTAGAAGATGATATTGAAGGTGGCCAAGAGAAGCAGAAGGAAGGGGAAGGCATAGCTCTGCCAGCATTTGGTTTGGCAACATACAAGATGCAAGGAGGGAATGTGTGGGTTGGAGGAAATTGTGGTCGGGACCAAGAAAGGCTATTGTCACTATTGAGTGTGGCAGATTCATGGTTGAAGCAATTAAGGGTCCAGCATCATGACTTTAATCACTTCATGGGCATTCGGCATGGCTAA 945 0.4444 MIFNKGSIRSNLDCFVRCTTPVVQSQFLPKSEITSLNRLWHPWERETVEYFTLGDLWNCYDEWSAYGAGVPITLTSGETLVQYYVPYLSAIQIFTSNSFREETESGDCETRDSYSDSFSEESECDKLWRWDGTSSEEGGSEQDSLWHFNDRLGHLYCQYFERATPYGRVPLMDKITGLAQRYPGLMSLRSVDLSPASWMAVAWYPIYHIPMGRTIKDLSTCFLTYHTLSSSFQGMDLEDDIEGGQEKQKEGEGIALPAFGLATYKMQGGNVWVGGNCGRDQERLLSLLSVADSWLKQLRVQHHDFNHFMGIRHG 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00844 314 Pfam Protein of unknown function (DUF789) 10 308 IPR008507 -
Cca10g00844 314 PANTHER T15D22.8 4 312 - -
Cca10g00844 314 PANTHER - 4 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00844 Cca-Chr10 9716657 9720242 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00844 - - gmx:100786536 630.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00844 10 9716657 9720242 Cca10g00844 10 9716657 9720242 ECH
Cca10g00844 10 9716657 9720242 Cca04g01102 04 12490917 12494765 PCT