Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01102 ATGATTTTCGATAAAGGGTCAATGCAATCCAAGTCCAACCTTGACTGCTTCCTCCGCCGTACGACACCTGTTGTGCCCTCTCAGTTTCTCCCCAAGCACGAGATTCGAAACCTTAACCGTTTGTGGCACCCGTGGGAGAGAGAAGCGGTTGAGTACTTCACTTTGAGCGATCTCTGGAATCGCTTCCATGAATGGAGTGCTTATGGAGCTGGAGTTCCCATCTCCTTGTCCAATAGGGAGACACTTGTTCAGTACTATGTTCCTTACCTCTCTGCAATTCAAATATTCACCAGCAACACTTTCAGGGAAGAGACTGAGTCGGGTGAGTGTGAGACAAGGGATTCGTACAGCGATTCGTACAGTGAAGAGAGCGAGTGTGATAAGCTGTGGAGGTGGGATGGAAGTTCATCAGAAGAGGGAGGATCAGAGCATGATTCTCTTTGTCATATGAATGACCGATTGGGACACCTGTATTTTCAGTATTTCGAGAGATCAACTCCATATGGAAGAGTCCCTCTAATGGATAAGATTACTGCATTAGCAGAGAGATATCCAGGGTTGATGACACTAAGAAGTGTAGATCTTTCCCCAGCTAGTTGGATGGCAGTTGCTTGGTACCCCATATATCATATTCCCATGGGCAGAACAATTAAAGATCTCTCAACATGCTTCCTCACATACCACACACTTTCATCTTCATTCCAAGGTATTATTCTTCCCTAA 723 0.455 MIFDKGSMQSKSNLDCFLRRTTPVVPSQFLPKHEIRNLNRLWHPWEREAVEYFTLSDLWNRFHEWSAYGAGVPISLSNRETLVQYYVPYLSAIQIFTSNTFREETESGECETRDSYSDSYSEESECDKLWRWDGSSSEEGGSEHDSLCHMNDRLGHLYFQYFERSTPYGRVPLMDKITALAERYPGLMTLRSVDLSPASWMAVAWYPIYHIPMGRTIKDLSTCFLTYHTLSSSFQGIILP 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01102 240 PANTHER - 4 237 - -
Cca04g01102 240 PANTHER T15D22.8 4 237 - -
Cca04g01102 240 Pfam Protein of unknown function (DUF789) 12 236 IPR008507 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01102 Cca-Chr4 12490917 12494765 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01102 - - gmx:100799384 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01102 04 12490917 12494765 Cca04g01102 04 12490917 12494765 ECH
Cca10g00844 10 9716657 9720242 Cca04g01102 04 12490917 12494765 PCT