Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00823 ATGAAAACGCCAAATGCCTCGCCGGTTTCTAGTCCGTCTCCGAAACCTCGTCAGCACCGAAACCGCGAACCCACTTCACGCTTTCTTCATTCCCCTCCCAACTCAACGACACACTCCTCCGAATGCCATTCCCCGCTCCGTCGCAAATCGTCGAGCCCCGCCAAAAGTCACCGTCCCACGGAGGAGCCGGGCCTCACGCGCCACCAACTATGGCCTTCCTCCGCCACTGCCAAGCGAAACTCCGGCACCCTCGCCGACCACATCACCCAAGACAGAATCATAGATCACACCAACGGTTCCCCGAGACACGTGGCAACAACAACGGCAGAATCACCATTttcttcttcttcttcttctAAGAAACCCTATAGCATTGTTCCGGGAAGATTGTCATTTGATGAGAACGCTAAACCCTTCTCCTCGCGGAGAAACTCTCTTGAATCAAAACCTGACGTGGAGAGAAAAGGAAGGGCTCGGAGAGGAACTTCGGATTCCGACGTGGCGAACTTGAACGGTGGAGATTTCTCCGTTTTGAAACGGTTCACGCTGAGAACTGGATCGTACAAGAGTTCCAAGTCTTGGTGGGCTTTGTCTCCAGGGAGGTCCGAGTCACCGGCTATGTCGGTTGAGAGCATGGATAAACCGATGTCGTTTTCGAGCTTCAAGCACCAAGTCACAAGTCCTACCAAGGCCAAAGGGTTTCTCAACATGGGTTTTGATCTCTTCAAGGGTAAGAAAAGTGGGGTTACCTCTTCGCCAAACATTTCTTTTGGAGTTTATAACTCCGAGGTTGCTCATAACCTTCGCTTGCTTGATAATCGTTTCATGCAATGGCGGTTTGCTAATGCTAGGGCACACGTTGTCAGTGCAAACATTTCTCACAAGGCTCAGAGCAATTTGATATGTGTTTGGGATGGTCTTACAAAGTTACGGCAATCTGTTCTGAAAAAGAAGATACAGTTTGTCAGAGAGAAACTTGAAATGAAAATCGCTTTTGTACTGTATTCTCAAATGAAACTATTGGAAGCTTGGGGTGGTCTGGAAAGGCAACACTTACAAGCAATTACTTCCATCAAGGAATGTTTGCATTCGGTTGTTTGCAGGGTTCCTCTTTTGGAAGGTGCTAGGGTGAACATGCAATCAACATCCATTGTTCTACGCCATGCATCTGATCTCACAGCTTCAATCAAGTCAATTTTAATTACATTTTCATCTTCAGAGGTTGATAAGATTGCTGCAATGCTATCAGAATTAGCTAAAATTGTTGCACGAGAGAAACAACTGTTAGAAGAGTTCTACGATCTTTTCCAGACCTTATATGTCTTTGAGATCTTACGTGCTGCTTAA 1347 0.464 MKTPNASPVSSPSPKPRQHRNREPTSRFLHSPPNSTTHSSECHSPLRRKSSSPAKSHRPTEEPGLTRHQLWPSSATAKRNSGTLADHITQDRIIDHTNGSPRHVATTTAESPFSSSSSSKKPYSIVPGRLSFDENAKPFSSRRNSLESKPDVERKGRARRGTSDSDVANLNGGDFSVLKRFTLRTGSYKSSKSWWALSPGRSESPAMSVESMDKPMSFSSFKHQVTSPTKAKGFLNMGFDLFKGKKSGVTSSPNISFGVYNSEVAHNLRLLDNRFMQWRFANARAHVVSANISHKAQSNLICVWDGLTKLRQSVLKKKIQFVREKLEMKIAFVLYSQMKLLEAWGGLERQHLQAITSIKECLHSVVCRVPLLEGARVNMQSTSIVLRHASDLTASIKSILITFSSSEVDKIAAMLSELAKIVAREKQLLEEFYDLFQTLYVFEILRAA 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00823 448 MobiDBLite consensus disorder prediction 1 169 - -
Cca10g00823 448 MobiDBLite consensus disorder prediction 67 87 - -
Cca10g00823 448 MobiDBLite consensus disorder prediction 1 15 - -
Cca10g00823 448 Pfam QWRF family 114 430 IPR007573 -
Cca10g00823 448 MobiDBLite consensus disorder prediction 27 49 - -
Cca10g00823 448 PANTHER QWRF MOTIF PROTEIN (DUF566)-RELATED 13 439 - -
Cca10g00823 448 MobiDBLite consensus disorder prediction 144 162 - -
Cca10g00823 448 MobiDBLite consensus disorder prediction 100 124 - -
Cca10g00823 448 PANTHER AUGMIN FAMILY MEMBER 13 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00823 Cca-Chr10 9459341 9461345 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00823 - - vra:106770120 593.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00823 10 9459341 9461345 Cca10g00823 10 9459341 9461345 ECH
Cca10g00823 10 9459341 9461345 Cca04g01087 04 12156421 12158542 PCT