Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01087 ATGGCATCGAGAGAAGGGACTTCTCATCATGATTCATGGATGATGAAGACACACAAAGTGATGAAAAAGGCTAACAATTCACTTATTGGGTACATGAGTCACAAGCCTCATTGGCCAATATCTCCTGGGAGTGTGGAGAAGATTCTGAAGCCCCAACACAAGAATGTGGAGAAGATTATTAACATGGGTTTTGATCTCTTCAAGAACAAGAAAACTTCAAACCCTGAGCAAGTTCATCAGTTGCGTTTGCTTGAAAACCATTTGATCCAATGGCGCTTTATAAATGCTAGAGCTCATGTTGCCAATCACAGATTGTCTCACATGGCTCAGAGCCATTTCATTTGTGCTTTCAATGATATAGCCAAGTTGCGACAATCGGTGGTGCAAAGGAAGAAGGAGATTCAGAGAGTAAAGCTTAAGATGAAGCTAACTTCTATACTACATTCTCAAATGAAGCTATTGAAAATGTGGCGAAAAATGAGAAGGCAACATGTAGCTGCAATTACCTTGATGAAAGACTGTTTGTATTCTGTTGCATGCAGAGTTTATCTTTTGGAAGGTGCAAAGGTGGATGTGCAATTATCATCCATTTATCAGAGGCGTGCAGCTGATCTAACAGATTCCATGAAGTCAATGTTATCTAGTTTTTCACCCTTGGCTGATAAGACTGCTGAGTTGATATCAGAATTAGCAAAAGTTGTAGTACAAGAGAGGTTTCTCCTAGAGGAATTCAATGATATCTTCCACACCATGTGTGTCCTTGAGCTTCAAGAAAGTAGCTTGATTTGCAATCTCATTCAACTTGAGTGTTGA 813 0.3973 MASREGTSHHDSWMMKTHKVMKKANNSLIGYMSHKPHWPISPGSVEKILKPQHKNVEKIINMGFDLFKNKKTSNPEQVHQLRLLENHLIQWRFINARAHVANHRLSHMAQSHFICAFNDIAKLRQSVVQRKKEIQRVKLKMKLTSILHSQMKLLKMWRKMRRQHVAAITLMKDCLYSVACRVYLLEGAKVDVQLSSIYQRRAADLTDSMKSMLSSFSPLADKTAELISELAKVVVQERFLLEEFNDIFHTMCVLELQESSLICNLIQLEC 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01087 270 Pfam QWRF family 47 242 IPR007573 -
Cca04g01087 270 PANTHER QWRF MOTIF PROTEIN (DUF566)-RELATED 14 269 - -
Cca04g01087 270 PANTHER AUGMIN FAMILY MEMBER 14 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01087 Cca-Chr4 12156421 12158542 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01087 - - ccaj:109799244 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00823 10 9459341 9461345 Cca04g01087 04 12156421 12158542 PCT