Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00807 ATGAGTTCAACAAGCCGTGCTTGGAGTTGGACCGTGGCAGCGAGTGTTGGGGTGGTGGAGGCTTTGAAGGACCAGGGCATATGCAGGTGGAACAGTGTGATGAGATCAGCACAACAACATGCTAAACATAATATGAGGACTTTCTCTCAGACCAAGAAGATTTCCTCTCAATCTTCTGCTATGGCTTCGACCAAATTCAAGGATGAGAAGGCTAAGCAATCAGAGGAGTCTTTGAGAACCGTCATGTACTTGAGTTGTTGGGGTCCTAACTCCTAA 276 0.471 MSSTSRAWSWTVAASVGVVEALKDQGICRWNSVMRSAQQHAKHNMRTFSQTKKISSQSSAMASTKFKDEKAKQSEESLRTVMYLSCWGPNS 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00807 91 PANTHER DUF3774 DOMAIN PROTEIN-RELATED 1 90 IPR022251 -
Cca10g00807 91 MobiDBLite consensus disorder prediction 40 72 - -
Cca10g00807 91 MobiDBLite consensus disorder prediction 40 64 - -
Cca10g00807 91 PANTHER WOUND-RESPONSIVE FAMILY PROTEIN 1 90 - -
Cca10g00807 91 Pfam Wound-induced protein 12 89 IPR022251 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00807 Cca-Chr10 9325675 9326561 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00807 - - gmx:100814873 170.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00807 10 9325675 9326561 Cca10g00807 10 9325675 9326561 ECH
Cca04g01079 04 12080728 12085793 Cca10g00807 10 9325675 9326561 PCT