Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00782 ATGCAATCATTCACTCCCTTTCTAGGGTCCGTCTTTTTCTTGGCGTTAATATCAAACACTCTTCCTTCCTCCAACACCGTCCCTTCCTACCCGACCCAAACGCCGACCCAGATATGCCGCCTCGACCTCTCCAACGAGCTCTTCGGCGGCGTCAACCACGCCTGCGGCACCACCCTCGACCGCAGCCGCTGCTGCCCCGTCCTCGCCGCCTGGCTCTTCGCGGCCCACGCTCGAACCGCCCTAGAAGTCTCCGCCCCGGCGCCGCCTCCCTCCGGCGACCTGCCCATGATGCCAGATGACTCCCAAAAGTGCGTCAACTCCCTCCAAGACTCACTTCGGAATCGGAGCATCCGAATCCCACAACCGAACGCCACCTGCGACGCCATTCTCTGCTTCTGCGGCATCAGGCTCCACCAAATAACCTCCCTCAGCTGCCCCAACGCGTTTAACGTCACCGCGTTTCGCAACGTCTCCGGCACCCACAACGCCACCCCCACCGCCGTCGTTCGCAGTTTGGAAAAGAATTGCCGCAACGCTTCCTACGCCGGCTGCACCCAATGCCTCAATGCCTTACAAAAGATAAAAGGGTgtaagaaggagaatgagagtgagagtgagagtgagagGGCGAAGAAGATGTTTAAGCGGGACTGTCAACTCATGGCGCTGACGTGGCTGCTTGGAAGGAACAAAACGGCGTACATACCCACCGTTTCGGCGGTGTTGCGAGCGGTGATGTACAGTGCGCATCCACACGAATCCAAGTGTAGTCCCGACCAGGAGAACATGCCCTTGGCCGTTGATTCCCTGCAATTTGAGACGAGCAAGGGTTCATCTTCGCTGTTGAGGTTGTCTTCGATTATGCTTGTCATCGTTACAGTTGTTTTCTGCTTCTGA 897 0.553 MQSFTPFLGSVFFLALISNTLPSSNTVPSYPTQTPTQICRLDLSNELFGGVNHACGTTLDRSRCCPVLAAWLFAAHARTALEVSAPAPPPSGDLPMMPDDSQKCVNSLQDSLRNRSIRIPQPNATCDAILCFCGIRLHQITSLSCPNAFNVTAFRNVSGTHNATPTAVVRSLEKNCRNASYAGCTQCLNALQKIKGCKKENESESESERAKKMFKRDCQLMALTWLLGRNKTAYIPTVSAVLRAVMYSAHPHESKCSPDQENMPLAVDSLQFETSKGSSSLLRLSSIMLVIVTVVFCF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00782 298 Pfam SPARK 36 218 IPR043891 -
Cca10g00782 298 PANTHER GPI-ANCHORED PROTEIN 1 297 IPR040376 -
Cca10g00782 298 PANTHER - 1 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00782 Cca-Chr10 9075646 9077139 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00782 - - var:108334244 484.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00782 10 9075646 9077139 Cca10g00782 10 9075646 9077139 ECH
Cca10g00782 10 9075646 9077139 Cca04g01075 04 12015810 12018092 PCT