Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01075 ATGCAATCATTTCTCGCGTGCCTCGCTTTTTCTACGTCACTACTATTATTTCTACTACTACCTTTCTCTCATGCCGGTTTAGTCTCCGAACCGGTGAGCGACCCCAACCAGCCCCTGGAACCGGGCGAGCACCCCTCCTCCAACACGGTACCCGCATTCCCGGTCCAGACCCAAGCCCAGACCTGCCGGCTCGACCTCTCCAACGAGCTCTTCGGCGGCGTGAAGGACGCCTGCGGCAAGGACCTCGACCGCAGCCGCTGCTGCCCCGTCCTCGCGGCCTGGCTCTTCGCCGCCCACGCCCGCTCCGCCCTGGAGGTCTCCGCGGCGCCACCGCCCTCCTCCGCGGACCTCCCCATGATGCCGGACGACTCCCAGAAGTGCGTGAACTCCCTCCAAGACTCCCTCCTCGCTCGCAACATCCGAATCCCCCAACCCAACGCCACCTGCGACGCCATCCTCTGCTTCTGCGGCATCAGACTCCACCAAATCACCTCCTTAACCTGCAACGCAGCGTTTAACGTCTCTCTCTCCCACAAAAACGCCACCCCCACCGCCGCCGTCCGCAGCCTCGAGAACAATTGCCGCAACTCATCCTACGCCGGTTGCACCAAATGCCTTGGCGCCCTGCAAAAGGTGAAGGGGTACAAGAATGAGAGAAAGGGTTACGGAGGGAGTGATAGGGTGAAGAAGATGTTCAACCGGGACTGTCAACTAATGGGTTTAACGTGGTTGCTAGCGAAGAACAAAACGACGTACATACCGACCGTTTCAGCGGTGTTGCGTGCGATCATGTACAGCGCGCATCCACACGAGTCCAAGTGTAGTCCCGACCAGGAGAACATGCCGCTGGCCGTTGATTCGCTTCAGTTGGAGAGTGGGAACGCGCCATTGCGAGCGTTGACGCTTTTGCCCCTGGCGTTGGCGATTCTACTTGTTTCATCTTTTGTTTAG 951 0.5931 MQSFLACLAFSTSLLLFLLLPFSHAGLVSEPVSDPNQPLEPGEHPSSNTVPAFPVQTQAQTCRLDLSNELFGGVKDACGKDLDRSRCCPVLAAWLFAAHARSALEVSAAPPPSSADLPMMPDDSQKCVNSLQDSLLARNIRIPQPNATCDAILCFCGIRLHQITSLTCNAAFNVSLSHKNATPTAAVRSLENNCRNSSYAGCTKCLGALQKVKGYKNERKGYGGSDRVKKMFNRDCQLMGLTWLLAKNKTTYIPTVSAVLRAIMYSAHPHESKCSPDQENMPLAVDSLQLESGNAPLRALTLLPLALAILLVSSFV 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01075 316 PANTHER GPI-ANCHORED PROTEIN 14 297 IPR040376 -
Cca04g01075 316 Pfam SPARK 57 215 IPR043891 -
Cca04g01075 316 PANTHER OS07G0557700 PROTEIN 14 297 - -
Cca04g01075 316 MobiDBLite consensus disorder prediction 31 51 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01075 Cca-Chr4 12015810 12018092 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01075 - - vra:106777532 513.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01075 04 12015810 12018092 Cca04g01075 04 12015810 12018092 ECH
Cca10g00782 10 9075646 9077139 Cca04g01075 04 12015810 12018092 PCT