Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00763 ATGTTTGGTGCCACACTCCCAAATTCAATAGCTCCTTCTCTAGCCATGCCTGAGGCTCCAAAGCACTTGCACCTTGATGATGATCATGATAGTAACACTACTAGCATCATGATCATGGACAACAATAAGAGAGCACTAGAATACATTGAAGAGGTTACCATCAAGGCTGATGAAATTCAAGAGAAGGTGCTTTCGGAGATCCTTTCTCGTAGTGCACACGCTGAGTACCTCCAACGCCATGACCTAGATGGGTGCACAGACAGAAGCACTTTCAAAAAGCGTATCCCCGTCGTCACTTACGAGGATCTAAAGCCAGATATTGATCGTATAGCCAACGGTGATACCTCCCCAATTTTATGTTGCAAACCCATATCAGAGTTTCTCACTAGCTCTGGAACTTCCGGTGGGGAGAGAAAACTGATGCCAAGCATCGAAGAGGAGCTAGAAAGGAGGTCATTACTCTATAGCCTCTTGATGCCGGTGATGGATCAGTTTGTTCCCGGTTTGGACAAAGGCAAAGGCATGTACTTTCTCTTCACAAAATCCGAAGCCAAAACCCCTGGTGGACTCCTTGCTCGTCCAGTTTTAACCAGCTACTACAAAAGCCCTCACTTCAAGCACCGCAAACACGACCCTTACGCAAACTACACCAGCCCCAACGAAACCATTCTCTGCCACGACTCCTTCCAAAGCATGTACTCTCAGTTGCTCTGTGGCCTCTGCCAAAGCGAACAAGTTCTCCGCGTTGGCGCTGTCTTCGCCTCCGGCTTCATTCGCGCCCTCAAGTTCCTCGAACACCACTTTCTTTCTCTCTGCAACGACATAAGAAATGGTACCCTAGACAACAGGATCACTGACCCTTTTGTGAGAGAGGCTGTCATGAGAATTCTCAAACCTAATCCCACGCTCGCGGATTTCGTTGAAGGGGAGTGCGTGAAGGGGTCGTGGATGGGGATGATTACTAGGCTTTGGCCTAATACTAAGTATGTTGATGTTATTGTTACGGGCACCATGTCTCAGTATATTCCTGTGTTGGATTATTATAGTAATGGGCTCCCTATTGTGTGCACCATGTATGCTTCTTCTGAGTGCTACTTTGGCTTGAATTTGAATCCGTTGTGTGACCCTAGTGAGGTTTCCTACACCCTCATTCCTACCATGGCCTACTTTGAGTTCTTGCCCCTCCACGAGATCGATGGACACAGTACTAATTCCATTTCTCACGTGGAGCAAGAACGTTTGGTAGATCTTGCAGATGTGAAGCTGGGTCAGGAGTATGAGCTTGTGGTCACCACTTATGCAGGACTTTATAGGTACTGCGTTGGTGACATACTCCGCGTAGCCGGATTCAAGAACAAGGCTCCACAATTCAACTTCGTGTGCCGAAAGAACGTGGTTCTCAGCATTGACTCTGACAAAACCGACGAAGTTGAGCTACAAAACGCTGTCAAAACTGGATCTCACCATCTTGCTCGATTCGGTGCATCGCTTACCGAATACACAAGCTGCACCGACACCTCCACCATCCCAGGCCACTACGTTCTCTACTGGGAAATCACCACCAATTCCCAAACCCCACTTCCCTCTTCCGTCTTCGCTGATTGTTGCTTTTCAATTGAGGAATCACTAAACAGCGTTTATCGCCAAGGAAGGGTATCAGACTCCATTGGACCCTTGGAGATCAAGCTCGTTGAGAATGGCACCTTTGACAAGCTCATGGACTTTGCTCTCACCCATGGTGCCTCCATAAACCAATACAAGACACCTCGTTGTGTCAAATATCCACCCATTTTGGAACTTCTAAACTCTAAAGTTGTTTCCAGTTATTTTAGCCCCAAGTGCCCCAATTGGCTTCCTGGTCACAAAAATTGGTGCACTACTCTTCATTCAAATTAG 1896 0.4726 MFGATLPNSIAPSLAMPEAPKHLHLDDDHDSNTTSIMIMDNNKRALEYIEEVTIKADEIQEKVLSEILSRSAHAEYLQRHDLDGCTDRSTFKKRIPVVTYEDLKPDIDRIANGDTSPILCCKPISEFLTSSGTSGGERKLMPSIEEELERRSLLYSLLMPVMDQFVPGLDKGKGMYFLFTKSEAKTPGGLLARPVLTSYYKSPHFKHRKHDPYANYTSPNETILCHDSFQSMYSQLLCGLCQSEQVLRVGAVFASGFIRALKFLEHHFLSLCNDIRNGTLDNRITDPFVREAVMRILKPNPTLADFVEGECVKGSWMGMITRLWPNTKYVDVIVTGTMSQYIPVLDYYSNGLPIVCTMYASSECYFGLNLNPLCDPSEVSYTLIPTMAYFEFLPLHEIDGHSTNSISHVEQERLVDLADVKLGQEYELVVTTYAGLYRYCVGDILRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAVKTGSHHLARFGASLTEYTSCTDTSTIPGHYVLYWEITTNSQTPLPSSVFADCCFSIEESLNSVYRQGRVSDSIGPLEIKLVENGTFDKLMDFALTHGASINQYKTPRCVKYPPILELLNSKVVSSYFSPKCPNWLPGHKNWCTTLHSN 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00763 631 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 34 624 - -
Cca10g00763 631 Pfam GH3 auxin-responsive promoter 49 593 IPR004993 -
Cca10g00763 631 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 34 624 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00763 Cca-Chr10 8715310 8720240 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00763 46 611 EF-hand Containing Proteins AT1G23160 48.785 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00763 K14487 - gmx:100806653 1076.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00763 10 8715310 8720240 Cca10g00763 10 8715310 8720240 ECH
Cca10g00763 10 8715310 8720240 Cca04g01059 04 11634572 11640117 PCT