Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01059 ATGCCTGAGGCTCCTAATACTAGCAGCATCATTGAGCAAAAGAATAAGAAAGCACTGAAATACATTGAGGATGTTACGAGCAACGCTGGTGAAATTCAGAAAAGGGTCCTCGCTGAGATCCTTTCTTCTAGTGCACACGTTGAGTACCTTCAACGCCATGGCTTAGATGGGTGCACAGACAGTGACACTTTCAAGAAGATCATGCCTGTGGTAACATACGAGGATTTAAAGCCAGATATTGATCGTATAGCTCATGGTGATACCTCCCCCATTCTATGTTCCAAACCTATTTCTGAGTTCCTCACTAGCTCTGGAACTTCTGGTGGGGAGAGAAAGTTGATGCCAACCATAGAAGACGAACTAGAGAGGAGATCACTGCTCTACAGCCTCTTGATGCCAGTGATGTCTCAATTCGTTCCTGGTTTGGACAAAGGCAAAGGAATGTACTTTCTGTTCATAAAATCCGAATCCAAAACCCCTGGTGGACTCCTGGCTCGTCCAGTTCTAACCAGCTACTACAAAAGCTCACACTTCAACAACACCAAAACACACTCACACGACCCCTACACAAACTACACTAGCCCCATTGAAACCATTCTCTGCCTAGACTCTTACCAAAGCATGTACTCTCAAATGCTATGTGGACTTTTTTTAAACCACCAAGTTCTTCGCGTTGGCGCAGTTTTCGCCTCCGGTTTCATCCGTGCCATCAAGTTCCTCGAGAGGCATTGGCTCAGGTTGTGCCACGACATAAGACATGGGACCATAGACCCTGAAATCACCGACTCCTCAGTTAGAGAGGCTGTTATGAAGATTCTTAAACCCAACCCCGAGCTTGCGGATTTCGTAGAGGGTGAGTGCAAGAAGGGGTGGTGGAAGGGGATCATTACTAGGTTGTGGCCGAATACTAAGTATGTTGATGTTATTGTTACTGGGACCATGTCTCAGTATATTTCGGTGTTGGATTACTATAGCGGTGGCTTGCCTCTTGTTTGCACCATGTATGCTTCGTCTGAGTGTTACTTTGGCCTCAACTTGAACCCTTTGTGTCAACCCACTCAGGTGTCTTACACGCTCCTTCCCACCATGGCATACTTTGAGTTCTTGCCGCTTGATAAGACAAAGGAATGTTTGGTTGATCTTGTGGATGTTGAGTTGGGTCAAGAGTATGAGCTTGTGGTCACCACCTATGCAGGACTTTATAGGTACCGCGTTGGTGACATACTCCGTGTGGCAGGATTCAAGAACAAGGCTCCTCAATTCAACTTCGTGTGCCGAAAGAACGTGGTTTTGAGCATTGATTCCGACAAGACCGACGAGGTTGAGCTACAAAACGCTGTGAAGAATGGAGCCAACCATCTGGCACAATTCGGTGCATCACTCACCGAATACACAAGCTGCACCGACACGTCCACTATCCCTGGCCACTATGTACTATACTGGGAAATTAGCATGAACAATAAGAATGATCAAATTCAGACCCCAATTCCCGCTTCTGTTTTTGAGGAGTGTTGCTTTGCAATTGAAGGGTCTCTCAACAGTGTGTATCGACAAGGAAGGGTGTCAGAGATCATTGGACCATTGGAACTCAAGATAGTGGAGAGTGGAACATTTGACAAGGTTATGGACTTTGCTCTTAGCCAGGGTGCCTCCATAAACCAGTATAAGACACCTCGTTGTGTCAAATATGCTCCAATTGTTGAGCTTCTTGACTCCAAGACCGTTTCTAATTACTTCAGTCCAAAATGCCCACACTGGGTTCCTGGTCACAAGAAGTGGTGCACCCTTGACTCCAAATAA 1800 0.4611 MPEAPNTSSIIEQKNKKALKYIEDVTSNAGEIQKRVLAEILSSSAHVEYLQRHGLDGCTDSDTFKKIMPVVTYEDLKPDIDRIAHGDTSPILCSKPISEFLTSSGTSGGERKLMPTIEDELERRSLLYSLLMPVMSQFVPGLDKGKGMYFLFIKSESKTPGGLLARPVLTSYYKSSHFNNTKTHSHDPYTNYTSPIETILCLDSYQSMYSQMLCGLFLNHQVLRVGAVFASGFIRAIKFLERHWLRLCHDIRHGTIDPEITDSSVREAVMKILKPNPELADFVEGECKKGWWKGIITRLWPNTKYVDVIVTGTMSQYISVLDYYSGGLPLVCTMYASSECYFGLNLNPLCQPTQVSYTLLPTMAYFEFLPLDKTKECLVDLVDVELGQEYELVVTTYAGLYRYRVGDILRVAGFKNKAPQFNFVCRKNVVLSIDSDKTDEVELQNAVKNGANHLAQFGASLTEYTSCTDTSTIPGHYVLYWEISMNNKNDQIQTPIPASVFEECCFAIEGSLNSVYRQGRVSEIIGPLELKIVESGTFDKVMDFALSQGASINQYKTPRCVKYAPIVELLDSKTVSNYFSPKCPHWVPGHKKWCTLDSK 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01059 599 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE 10 593 - -
Cca04g01059 599 Pfam GH3 auxin-responsive promoter 22 562 IPR004993 -
Cca04g01059 599 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 10 593 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01059 Cca-Chr4 11634572 11640117 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g01059 8 580 EF-hand Containing Proteins AT1G23160 49.654 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01059 K14487 - gmx:100819676 1065.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00763 10 8715310 8720240 Cca04g01059 04 11634572 11640117 PCT