Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00741 ATGCACTCACTTCACAAAACCATCACAAACTTAATAAACTTGCTTTTATTCTCCTCTTCATTTTGTGCCATCTATATCCTTATACTATTAGGAACATCATTAAACCAACAAAACGTGCATTCTTCATTAAAAAATGTCCAAAATGTGTACGAATCTTCCACCACCACCACAACAACAACAACCCTTGATCATGTTGTGTTTGGAATTGCTTCAAGTGGGTCTTCATGGCCCAAGAGGAAGGACTACGTTAAGCTATGGTGGAACCGCGAACACAACACAACAATGAGGGGTTGTGTATTCGTTGAAACGCTTCCACTCTCAGTTGTTGAAGAGAAAGACAATGGTACTTCTCTTCCTCCTCTTTGTGTCTCCGAAGACACTTCTCGGTTTGGCTACACGTACCGGGGTGGCATGCGATCTGCGATTCGTGTGGCACGTGTGGTGAAGGAGACAGTGGCACTGAACTATTCTCATGTTAAGTGGTACGTGTTTGGGGACGATGACACGCTTTTCTTCCCTCGGAATTTGGTCAAAACTCTTTCCAAATATGATCACGGGCTTTGGTACTACGTTGGTGCCAACTCAGAGAGTTATAAGCAGAACTGGTTTTTTGGGTTTGGAATGGGATTTGGTGGGGCTGGTTTTGCCATCAGTTCTTCTTTAGCAACGGTTTTGGCCAAGGTGTTTGATTCGTGTATAGAAAGGTATCCTCATGTGTATGGAAGTGATGCCAGGGTGTACTCTTGCATCACAGAACTAGGTGTAGGGTTAACACATGAACCAGGCTTTCACCAGGTAGATTTAAGAGGAAACGCCTTTGGCCTATTGGCAGCACATCCAGTTACACCCTTGTTGTCCCTTCATCACCCAGAGAAAATTGATCCAATTTTTCCAAACATGACAACCATAAAAGCTCTACAACATTTATTTGAAGCTGCTGATGTTGATTCCCATAGGCTTCTGCAACAAACAGTTTGCTATGAGAAACGGTTTTCATGGACAATCTCAGTGTCATGGGGTTATGCTGTTCAGGTGTTCCATAACCACATGTCTTTGCCGGATGTTCTTAAAGTTCAAAAAACATTCAAGAAGTGGACCGGAGGAACTGTTTTGGCAGACCTATTTTCTTTCAACACAAGAGAGTTTCACCCTGACACATGTAGAAGGCCCACCATTTTCTATCTTGAAAATTTGTTGCAAAGTAAAGATGGCACAATAATAAGCAGTTACCAGAAATCTATCCAAAATTGCTCATCCAACGTGGTACCAGAAGTTATCAGAGTGGCCACAAGTAAGCTAGTGCTTGATATCAAACAGTTGCTGACTCAAAGAAGGCACTGCTGTGATGTGTTGCCCTCTAATGTTTCTCACTTAATGGAGATTGCAATAAGGGAATGCGCAGAGGATGAATTGATTCACATGCAATGA 1428 0.4251 MHSLHKTITNLINLLLFSSSFCAIYILILLGTSLNQQNVHSSLKNVQNVYESSTTTTTTTTLDHVVFGIASSGSSWPKRKDYVKLWWNREHNTTMRGCVFVETLPLSVVEEKDNGTSLPPLCVSEDTSRFGYTYRGGMRSAIRVARVVKETVALNYSHVKWYVFGDDDTLFFPRNLVKTLSKYDHGLWYYVGANSESYKQNWFFGFGMGFGGAGFAISSSLATVLAKVFDSCIERYPHVYGSDARVYSCITELGVGLTHEPGFHQVDLRGNAFGLLAAHPVTPLLSLHHPEKIDPIFPNMTTIKALQHLFEAADVDSHRLLQQTVCYEKRFSWTISVSWGYAVQVFHNHMSLPDVLKVQKTFKKWTGGTVLADLFSFNTREFHPDTCRRPTIFYLENLLQSKDGTIISSYQKSIQNCSSNVVPEVIRVATSKLVLDIKQLLTQRRHCCDVLPSNVSHLMEIAIRECAEDELIHMQ 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00741 475 PANTHER FRINGE-RELATED 5 474 - -
Cca10g00741 475 Gene3D - 35 350 - -
Cca10g00741 475 Pfam Protein of unknown function, DUF604 200 448 IPR006740 -
Cca10g00741 475 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 5 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00741 Cca-Chr10 8389434 8396507 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00741 8 441 Glycosyltransferase AT1G05280 50.113 1.92e-157 453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00741 - - gmx:100778878 720.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01043 04 11391975 11394738 Cca10g00741 10 8389434 8396507 PCT