Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00721 ATGGAGCATTCTCTGAATCCTTCTATGGAAAAAACAGTGTCTGGCAGTGCCAACGAGGAAAGTGGGTGGACTTCTTACTTCGAAGAATTCTCCCTTGGCATGGAGCAGCAAAGTTATTATTCCAGTTTAGGTGGTTCATCTTTGGTCTCAGATGCTGCTTCTTCTGCTGCATGGAAGCTCTCACATGATCACAATGATTACCTTGTTTCCAACTCTGCTTTTGGAGTTAGGGACTCACCAAATGTCTTAAAGAGAAAACTTTGTTTCAAGAAAACAAGAACCCAACAGATTTCAGATGATGACTCTTTGGAGGACACTGCTAGCTCCCCTGTCAACAGTCCCAAGTTAGGGGACTTGAAAGTTTCCAAGATTGATGATCAAATAGACGGCTCTACTTCTGGGGGTAAGGGGTTTAAACCAGAGAATTATCCAAAGCTACAGACCGATGATTGTGACATAAATTTTAATGAAAACAACAAGGAGTGCAACACAGACTTGAAGAAAAAGGGTGAAAAAGGCTTTGTTAGTATAGCAGTCAAAGTAAACCAGGTTGGTCAACATGTTTAA 567 0.4127 MEHSLNPSMEKTVSGSANEESGWTSYFEEFSLGMEQQSYYSSLGGSSLVSDAASSAAWKLSHDHNDYLVSNSAFGVRDSPNVLKRKLCFKKTRTQQISDDDSLEDTASSPVNSPKLGDLKVSKIDDQIDGSTSGGKGFKPENYPKLQTDDCDINFNENNKECNTDLKKKGEKGFVSIAVKVNQVGQHV 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00721 188 MobiDBLite consensus disorder prediction 101 115 - -
Cca10g00721 188 MobiDBLite consensus disorder prediction 98 120 - -
Cca10g00721 188 PANTHER VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED 1 170 IPR039280 GO:0010089
Cca10g00721 188 PANTHER VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED 1 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00721 Cca-Chr10 8195146 8196479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00721 - - gmx:100799390 224.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00721 10 8195146 8196479 Cca04g01028 04 11216575 11217746 PCT