Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01028 ATGGATCATTCTCTGAATTGTTCATCCAGAGGCAGAGCAGTGGCTGGCAGCAAAACCCCAAATGGTTCTGATGGGGAAAGTGGATGGACATCTTACTTGCAAGATTTCTCAAAGGGCATAGAGCCAAGTTACTGTTCCAGTTTGGATGGCTCCTCTTTGCTCTCAGATGCTGCTTCTTCTGCTGCATGGAAATTTTCTCATCACAATCATCTCCTCTCCAGTGCACCAAATCTACCCAAAAAACTATGTTTCAAGAAAGCAAGAGCCAAACAGATATCAGAAGATGACCCTTTGGAAGACACTGCTAGCTCTCCAGTCAATAGCCCCAAGGTCAGAGACTTGAATCAAACTGAAATCAGTTCCAGGAAGGTTGATGATCAACTAGAAGGTTCTATGGGTAAGGGAATCACATCATCAGGGCCTTATTCAGATTTGAAGATGGATGATGATAAGCATGATTTGAATTTTAATGGAAAGAATATTGATTGCAAAGACTTGAAGAAAAGGGGGCTATGCTTGGTTCCTTTGTCTTTGTTGGTTAATTATTTGGGGTGA 555 0.4198 MDHSLNCSSRGRAVAGSKTPNGSDGESGWTSYLQDFSKGIEPSYCSSLDGSSLLSDAASSAAWKFSHHNHLLSSAPNLPKKLCFKKARAKQISEDDPLEDTASSPVNSPKVRDLNQTEISSRKVDDQLEGSMGKGITSSGPYSDLKMDDDKHDLNFNGKNIDCKDLKKRGLCLVPLSLLVNYLG 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01028 184 PANTHER VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED 1 184 - -
Cca04g01028 184 MobiDBLite consensus disorder prediction 1 27 - -
Cca04g01028 184 PANTHER VASCULAR-RELATED UNKNOWN PROTEIN 1-RELATED 1 184 IPR039280 GO:0010089
Cca04g01028 184 MobiDBLite consensus disorder prediction 98 115 - -
Cca04g01028 184 MobiDBLite consensus disorder prediction 94 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01028 Cca-Chr4 11216575 11217746 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01028 - - gmx:100804712 290.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01028 04 11216575 11217746 Cca04g01028 04 11216575 11217746 ECH
Cca10g00721 10 8195146 8196479 Cca04g01028 04 11216575 11217746 PCT