Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00701 ATGTTGCAGCTTCTCTACGCCCTCATTTTTGGCCAAATGTTTGTCATCCTCAGCTTCCTCTTCAAAACTCCGGTGAGAAAGCTGGTCATCATCACGTTGGATCGCCTCAAGCGAGGTCGCGGCCCCCTCGTCGTTAAGACCCTCGGCGCCACCTTGGTCGTGCTGCTGGCTTCCTCCCTCTACAGCATTTCCAAGATCCACCGTCGTGCCCTCGAAGGTGCCCTCGTTAACCCCACCGACCAAGTCCTCGTCTCCAAGCACATGCTCGAAGCTTCTCTTCTCGGGTTTGTGCTGTTCCTGTTTCTGATGATAGATAGATTGCACCATTACATCAGAGAGCTTCGGTTATTGAGAAAGGCCATGGAGGCTGCTAAGAAACAGAGTCGAAGTTTTGAGGACGGTAAAAGTGTCAGTGCAGCGGAACAAAAGGCATTGATGGAAGAAATCGCCACGTTGAAGCCCAAAATTAAGAATTTGGAATCCGAGTGTGAGGTGAAAGCAAGCAAGGCTATGGCCTTGGAAGCTGAGGTTGAGGCTCTTAGAAAGCAATCTGAGGGTTTCCTTATGGAATATGATCGTCTCTTGGCGGATAATCAGAATCTTCGGAGTCAGTTGCAGGCTATTGATCATAACTCTTCCCATTCTCTTAACAAAAAGAGCACGTGA 666 0.4925 MLQLLYALIFGQMFVILSFLFKTPVRKLVIITLDRLKRGRGPLVVKTLGATLVVLLASSLYSISKIHRRALEGALVNPTDQVLVSKHMLEASLLGFVLFLFLMIDRLHHYIRELRLLRKAMEAAKKQSRSFEDGKSVSAAEQKALMEEIATLKPKIKNLESECEVKASKAMALEAEVEALRKQSEGFLMEYDRLLADNQNLRSQLQAIDHNSSHSLNKKST 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00701 221 Gene3D - 138 201 - -
Cca10g00701 221 PANTHER B-CELL RECEPTOR-ASSOCIATED 31-LIKE PROTEIN-RELATED 1 216 - -
Cca10g00701 221 Coils Coil 156 211 - -
Cca10g00701 221 Coils Coil 107 127 - -
Cca10g00701 221 PANTHER BCR-ASSOCIATED PROTEIN, BAP 1 216 IPR008417 GO:0005783|GO:0006886|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00701 Cca-Chr10 7846560 7848697 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00701 K14009 - gmx:100790767 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00701 10 7846560 7848697 Cca10g00701 10 7846560 7848697 ECH
Cca10g00701 10 7846560 7848697 Cca04g01004 04 10908152 10911609 PCT