Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g01004 ATGTTGCAGCTACTTTACACTGCCATTTTCGCCGAAATGCTTCTCATTCTCACCCTCGTTTTCAAAACCCCTCTCAGAAAACTCGTCATCGTTTCCCTGGATCGCGTGAAGCGCGGTCGCGGCCCCGTCGTCGTGTCCACCGTCGGCGCCACATTGGTGGTGGTCCTCGCCTCCAGCCTCTACAGCATGGCCAAGATCCAGCAACGCACCCTCGAGGCCGGTATAGTCAACCCCACCGACCAAGTCCTCATGTCCAAGCACATGCTCGAAGCTTCTCTCATGGGGTTTGTGCTATTCCTCTCTCTGATGATTGATAGGTTGCACCATTACATTAGAGAGCTTCGTTTACTGAGGAAGACCATGGAAGCTATTAAGAAACAAAGCCGAAGTTTTGAAGATGGTAAAAATGGCAATACAGAGGAACATAAAGCATTGAGTGAAGAAATTGGTACATTGAAGTCCACAATTAAGAAACTAGAATCTGAATGCGAGGCAAAAGGAGATCAGGCTAAGACTTTGAAAAGTGAAGTAGAGGCTCTTAAAAAGCAATCTGAGGGGTTCCTTATGGAGTATGATCGCCTCTTGGAAGACAATCAGAGTCTGCGGAGTCAGATGCAGGCCTTTGACCCTGATAATAAAAAGAGCACGTGA 651 0.4777 MLQLLYTAIFAEMLLILTLVFKTPLRKLVIVSLDRVKRGRGPVVVSTVGATLVVVLASSLYSMAKIQQRTLEAGIVNPTDQVLMSKHMLEASLMGFVLFLSLMIDRLHHYIRELRLLRKTMEAIKKQSRSFEDGKNGNTEEHKALSEEIGTLKSTIKKLESECEAKGDQAKTLKSEVEALKKQSEGFLMEYDRLLEDNQSLRSQMQAFDPDNKKST 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g01004 216 Coils Coil 142 183 - -
Cca04g01004 216 PANTHER BCR-ASSOCIATED PROTEIN, BAP 1 211 IPR008417 GO:0005783|GO:0006886|GO:0016021
Cca04g01004 216 PANTHER B-CELL RECEPTOR-ASSOCIATED 31-LIKE PROTEIN-RELATED 1 211 - -
Cca04g01004 216 Coils Coil 107 127 - -
Cca04g01004 216 Gene3D - 138 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g01004 Cca-Chr4 10908152 10911609 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g01004 K14009 - gmx:100820199 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g01004 04 10908152 10911609 Cca04g01004 04 10908152 10911609 ECH
Cca10g00701 10 7846560 7848697 Cca04g01004 04 10908152 10911609 PCT