Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00695 ATGGCCAACCAAGAATATGATCTTCCTCTCTATGAAAAAGTTTGGCTAAAGCGCAGATTTCAAAGAGTAATAGACATCTTCATTTTACTATTACTCCTCTTGCTTCTTAGTTACCGTCTTTTCTCACCCAACACCTTCACTTTCCCATGGCTCCTTGCTTTCATTTGTGAATCATGGTTCACCTTCACTTGGATTGTGATTCTCAACGCCAAGTGGAGTCCTGCACTAACCATAACCCACCCAGAAAGGCTCTTGCAAAGGGTACCTGAACTTCCACCCATCGATTTGTTTGTGACAACAGCAGATGCTATACTTGAACCACCCATCATCACAGTCAACACTGTCTTATCTTTGTTAGCTCTTGATTATCCTTCTAACAAGTTAGCTTGCTATGTTTCTGATGATGGATGTTCCCCTCTTACTTTCTACGCACTTGTTGAAGCCTCCAAATTCGCTAAGCTTTGGGTACCTTTCTGTAAGAAGCACAACGTACAAGTGAGAGCACCCTTCAGATACTTCTCTCAGGTTGCCACTGACACAAGTGAAGACTCACTTGAATTCAAACAAGAATGGTTACGAATGAAGGATATGTATGACAATCTTAGCCACAAAATTGTAGAGGTAACACGAAAAAAAAATCCATTTCAACTTGATGGAGAATTTGCAGTTTTCAGAAATACAGAGCAAAGAAATCATCCAACCATAATCAAGGTTATATCGGAAAATATTGATGGTCTTTTGGATGGGTTGCCTCATCTGATATACATATCTAGAGAGAAGAGGCCACAGTATCCTCATAATTACAAAGCTGGAGCAATGAATGTGTTGACAAGGGTTTCCGGGTTGATGAGCAATGCTCCTTTTCTGTTGAATGTAGACTGTGACATGTTTGTGAACAATCCAAAAATTGCTCTACATGCCATGTGCATTTTGCTGGATTCAAAGAGTGGAAAAGAAGTTGCTTTCGTTCAATGTTTCCAACAATTCTACGATGGAATAAAAGATGACCCTTTCGGAAATCAGTGGGTGGCTGCATTTGAGTACATAATCCGGGGCATGGCAGGACTTCAAGGACCTTTATATGTGGGAACAAACACCGTTCATAGAAGAAAAACTATTTATGGTCTTTATCCTGAAGAATTCGGAAGTGGGATAAAAGAAAGATTAGTAGAAAATATATTAATGCAACAATTTGGAAGTTCAAAGGAGTTTGCCAAATCAGCAGTTAGTGCTTTGGAAGACAGTGCACATTCTGCTAATGATATTACTCCTTCCAACTTAATTGAGGCAGCAACCCAAGTGGCTAATTGTGGATATGAACATGGCACTTGCTGGGGTAAACAGATGGGGTGGTTGTATGGATCAGTGGCAGAAGATGTACCAACCGGATTGAATATTCAAAGAAGAGGTTGGAGATCAGAGTGTTGCACCCCTCATCCAATTGCCTTCACAGGATGCACTCCTGGAGGGTTACTCTCTACAATGATACAACACAAGAGGTGGTTCTCTGGCCACACTGTAGTCATCTTTGGAAAGCATTCTCCAATTATGGGCATGCTCTTTGGTAAGATCCAATTCAGAGCAGGCTTGTCTTATATTTGGCTTAACGCCATGGGCTTGCGTGGTCCCTTCCTAGTTTCCTATGTTGCTCTAATTGCATATTGCATCATTACCAACACCAATATCTTTCCTAAGGGACCTGGCCTTTGGATTTCGATTGCCCTTTTTGTGATTTACAATGTAGATACTCTAGTGGAGTACCTTGCAATTGGGTTGTCAATACGACATTGGTGGAACAATCAGAGAATGTGCATGATTAGAACCACGACCGCATCATTTCTTGGATTTTTGAGTGGTTTGCTTAAGATATCCGGGTTATCTGAAACTGATTTTGAAATAACGGAGAAGGAACACCCAAGTTCTAGTGGTGATGGAAATCGTGCAGATGCTGGAAGGTTCACGTTCGGAGAGTCCCAAGTTTTTGTGGTAGGCACTACCATTTTGGTGGTTCATTTGATAGCCATGTTGATCAGGTTTTGGGGGTTGTATCAACCTTTATCTCATAATACGAATGGCTGTGGACTAGGGGAGTTCATGGCTAGTACGTATGTGGTGCTGTGTTACTGGCCATATTTTAAAGGGTTGTTTGCCAAAGGTAAATACGGGATTCCCATATCCATCATCTTCAAGTCACTGTTTTTGGCTTTTGTCTTCGTGTACTTTTGTACTAGTAACAATTGA 2241 0.4114 MANQEYDLPLYEKVWLKRRFQRVIDIFILLLLLLLLSYRLFSPNTFTFPWLLAFICESWFTFTWIVILNAKWSPALTITHPERLLQRVPELPPIDLFVTTADAILEPPIITVNTVLSLLALDYPSNKLACYVSDDGCSPLTFYALVEASKFAKLWVPFCKKHNVQVRAPFRYFSQVATDTSEDSLEFKQEWLRMKDMYDNLSHKIVEVTRKKNPFQLDGEFAVFRNTEQRNHPTIIKVISENIDGLLDGLPHLIYISREKRPQYPHNYKAGAMNVLTRVSGLMSNAPFLLNVDCDMFVNNPKIALHAMCILLDSKSGKEVAFVQCFQQFYDGIKDDPFGNQWVAAFEYIIRGMAGLQGPLYVGTNTVHRRKTIYGLYPEEFGSGIKERLVENILMQQFGSSKEFAKSAVSALEDSAHSANDITPSNLIEAATQVANCGYEHGTCWGKQMGWLYGSVAEDVPTGLNIQRRGWRSECCTPHPIAFTGCTPGGLLSTMIQHKRWFSGHTVVIFGKHSPIMGMLFGKIQFRAGLSYIWLNAMGLRGPFLVSYVALIAYCIITNTNIFPKGPGLWISIALFVIYNVDTLVEYLAIGLSIRHWWNNQRMCMIRTTTASFLGFLSGLLKISGLSETDFEITEKEHPSSSGDGNRADAGRFTFGESQVFVVGTTILVVHLIAMLIRFWGLYQPLSHNTNGCGLGEFMASTYVVLCYWPYFKGLFAKGKYGIPISIIFKSLFLAFVFVYFCTSNN 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00695 746 PANTHER CELLULOSE SYNTHASE H1-LIKE PROTEIN 2 745 - -
Cca10g00695 746 SUPERFAMILY Nucleotide-diphospho-sugar transferases 111 533 IPR029044 -
Cca10g00695 746 Pfam Cellulose synthase 391 739 IPR005150 GO:0016020|GO:0016760|GO:0030244
Cca10g00695 746 Pfam Cellulose synthase 94 379 IPR005150 GO:0016020|GO:0016760|GO:0030244
Cca10g00695 746 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 2 745 - -
Cca10g00695 746 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 224 390 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00695 Cca-Chr10 7768523 7772338 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00695 1 745 Glycosyltransferase AT2G32530 43.937 0.0 618
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00695 - - gmx:100795671 1216.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00695 10 7768523 7772338 Cca10g00695 10 7768523 7772338 ECH
Cca10g00695 10 7768523 7772338 Cca04g00998 04 10846799 10860683 PCT