Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00693 ATGGGTGGTGGCGGTGCGGTGAGGTTAGGGTTGTGGGCGGTGGCGCTGTGCATTGCAGGGTACATAGTGGGTCCACCTCTCTACTGGCACTTCGTTGAACTCATCAAACACtcttcttcttcttcttcttGCGCTCCTTGCATCTGCGATTGCTCTTCCCACCCCACCGTTTCCATTCCCCAACGGCTTGCCAATTCCTCATTTCAAGATTGTGCAAAGCGCAATCCAGAGGTGGATGGAGACACTGAAAAGAATGTTGCGGAGTTACTGTCAGAAGAACTAAATCTCCGGGAGACTGAAGCTTTGAAAATTCAGCATCGTGGTGACATGGCTCTGCTGGAGTCCAAGAAGATGGCATCTCAATATCAAAAAGAAGCAGACAAGTGCAATTCAGGAATGGAGACATGTGAAGAAGCCAGGGAAAAGGCTGAGATGGCATTAGTGGCTCAGAAGAAACTCACTGCATTGTGGGAACTGAGAGCTCGTCAGAAAGGATGGAAAGAAGGGATTGCCAAATCTAAGACTCGTTCTCAAGGGAAAGTACAAACTGCTTAA 555 0.4739 MGGGGAVRLGLWAVALCIAGYIVGPPLYWHFVELIKHSSSSSSCAPCICDCSSHPTVSIPQRLANSSFQDCAKRNPEVDGDTEKNVAELLSEELNLRETEALKIQHRGDMALLESKKMASQYQKEADKCNSGMETCEEAREKAEMALVAQKKLTALWELRARQKGWKEGIAKSKTRSQGKVQTA 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00693 184 Pfam Protein of unknown function (DUF1068) 6 169 IPR010471 -
Cca10g00693 184 PANTHER - 6 173 - -
Cca10g00693 184 PANTHER EXPRESSED PROTEIN 6 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00693 Cca-Chr10 7738823 7741894 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00693 - - gmx:100306449 301.982
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00693 10 7738823 7741894 Cca04g00997 04 10823173 10826119 PCT