Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00997 ATGGCATTGGCTATGAACCAATCAAGGGCTGTGTTGTTAAGGGTGAGTTTGGTGGTGGTGGCTCTCTGCATAGCAGGCTACATAGTGGGGCCCCCTCTCTACTGGCACTTCGTTGAAGGCTTGGCTGCCCTCAAACACTCTTCCTCTGCTTGTGCTCCCTGCATCTGTGATTGCTCTTCCCAACCCATCCTTTCCATTCCCCAAGGGCTGAGCAACTCTTCCTTTGGAGATTGTGCAAAGGCTGATCCAGAAGTGGGTGGAGACACTGAAAAGAACTTTGCAGAGCTATTGACAGAAGAACTAAAGCTACGTGAGAATCAAGCCGTGGAAAATCAGCGACACGCTGACATGGCACTACTTGAGGCGAAGAAGATTGCATCTCAGTATCAGAAGGAAGCAGACAAGTGTAACTCAGGGATGGAAACCTGTGAGGAGGCGAGAGAGAAGGCTGAGTTGGCATTAGTTGCGCAGAAGAAGCTAACGGCTCTGTGGGAACTCAGAGCTCGTCAGAAAGGGTGGAAGGAAGGGCTTGCCAAATCTCATACACACTCTCAAGGGAAGGTACAGAGTTCTTAG 576 0.5035 MALAMNQSRAVLLRVSLVVVALCIAGYIVGPPLYWHFVEGLAALKHSSSACAPCICDCSSQPILSIPQGLSNSSFGDCAKADPEVGGDTEKNFAELLTEELKLRENQAVENQRHADMALLEAKKIASQYQKEADKCNSGMETCEEAREKAELALVAQKKLTALWELRARQKGWKEGLAKSHTHSQGKVQSS 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00997 191 Pfam Protein of unknown function (DUF1068) 12 176 IPR010471 -
Cca04g00997 191 PANTHER - 8 180 - -
Cca04g00997 191 PANTHER EXPRESSED PROTEIN 8 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00997 Cca-Chr4 10823173 10826119 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00997 - - gmx:100527412 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00997 04 10823173 10826119 Cca04g00997 04 10823173 10826119 ECH
Cca10g00693 10 7738823 7741894 Cca04g00997 04 10823173 10826119 PCT