Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00673 ATGCAGAAGCAGGGCATTGTAACCATTTTGGGCTCTAACCACGATGCTGCCACTTCCCTTCGAAGGACACTATCCGCAGACATGTCCTCCAAGACATGGCTTTCTCAAAACGGGTTTTCTTCCATGAAGAAGATCGCTTCCTCCGAAGAACTCTCTCACTCACTCACAAAATCTTCCACCACGGACTCATCATCATCCCCGTCCGAAGAAGAGTTGCAAATTTGGAACACAACTCAAAAGAAGGAGCAGCCAGAAGAGTTGGACATGTGGAGCTCAATTTTGTCACAGAAAGCCAACGATGAAGCATCCAAATTAACCGCAACAACACCTTATGTTCACCCACTCATGAGAAGGTCCAAGAGTTGTTTGAGTGAGAAGAGTCTCCAGATATGCACGGAGAGTCTTGGATCCGAAACTGGCTCAGATGGGTTCTCATCTGAGACAGGGGATTCagaagaagaagaagaagaagaggaggaagagaaagtgaaagagattgagcaaatgacacaggaagtggaggagTTGCACGTGCGAAAACTACATAACTATGGTACTAAGAAATCCTTGTCTTTGCCTCGTTCTTTTCCTCCTCCGCTCCCTTCACTCCACATGCGGTCTCACCGCGACAACGGAAGGTTGTTCCTACAAGCCGTGGAACTTCCTTCGCAGAACAACTTCTGCGCTCAGCGAGAAAACGGTCGCCTTGTCCTCACCTTCGCCCCCGGCGAGGAAGTGgaggaagaggaagaagaagtgatgaaaattgagggagatggtgaggcagaggaagcagaagCACCCATGTTGGTGTCTAGTGGGATGAGGCTAGCATTAATGATGAATAAGCCAATTAAGTTAGGTGACACCACTATTACTATGAGTCCAAAATGGTCGAACGAGGTGGTGAATTTTAAGGATGTTGATGTGGTGCAACATAGTCCACTTCCACCTAGGCCAAGGGTGAGGTCAATTCCCCCAACTATTTCAGCTGCTTTCAATGCTTATGAATACTATTGGAGGACCAAGCCTGTGGCAAAAGCTTCTAAATTTCAACAATGTTTGGAGAACAATTTGAAGACTTGCAAGGATTCTAGGAGGCCTTTTCTGTTCTGGGAACCCTATTGcattgctacttga 1140 0.4105 MQKQGIVTILGSNHDAATSLRRTLSADMSSKTWLSQNGFSSMKKIASSEELSHSLTKSSTTDSSSSPSEEELQIWNTTQKKEQPEELDMWSSILSQKANDEASKLTATTPYVHPLMRRSKSCLSEKSLQICTESLGSETGSDGFSSETGDSEEEEEEEEEEKVKEIEQMTQEVEELHVRKLHNYGTKKSLSLPRSFPPPLPSLHMRSHRDNGRLFLQAVELPSQNNFCAQRENGRLVLTFAPGEEVEEEEEEVMKIEGDGEAEEAEAPMLVSSGMRLALMMNKPIKLGDTTITMSPKWSNEVVNFKDVDVVQHSPLPPRPRVRSIPPTISAAFNAYEYYWRTKPVAKASKFQQCLENNLKTCKDSRRPFLFWEPYCIAT 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00673 379 Coils Coil 246 266 - -
Cca10g00673 379 MobiDBLite consensus disorder prediction 133 163 - -
Cca10g00673 379 MobiDBLite consensus disorder prediction 45 86 - -
Cca10g00673 379 PANTHER PROTEIN FAF-LIKE, CHLOROPLASTIC 2 379 - -
Cca10g00673 379 MobiDBLite consensus disorder prediction 45 80 - -
Cca10g00673 379 Pfam Fantastic Four meristem regulator 195 240 IPR046431 -
Cca10g00673 379 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 2 379 IPR021410 -
Cca10g00673 379 MobiDBLite consensus disorder prediction 147 163 - -
Cca10g00673 379 Coils Coil 149 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00673 Cca-Chr10 7457758 7458897 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00673 - - ccaj:109806397 635.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00673 10 7457758 7458897 Cca10g00673 10 7457758 7458897 ECH
Cca10g00673 10 7457758 7458897 Cca04g00980 04 10587154 10588816 PCT