Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00653 ATGACCAAGGAGTGCGGCTACCACGACGACCACCGGCGGCAGCTCCTCCGTCGCGCATTGGCGGCGCTCCTAGGGTTCATATTCCTCATTCTCCTCGTAATCTTCCTCATATGGATCATCCTCCGGCCGACCAAGCCCCGCTTCGTCCTGGAAGACGCCACCGTGTACGCCTTCAACCTCTCCTCCACCGGCGACACGCCCTCCGCCGCAGCCCCCACCCCGAACACCCTCACACTGACCATGCAAGTGACGCTCTCGGCCTTCAACCCCAACAACCGCATCGGCATTTACTACACCAAACTCGACGCCTACGCCTCCTACCGCGGCCAGCAGGTCTCCCTCGCCACCGCGCTCCCTCCCACCTACCAGGGCCACCGCGACACCGCCGTCTGGTCGCCCTTCCTCTACGGCGCCGCCGTCCCCGTCTCCCCCTTCATGCTCGAGATTCTCCGCCAGGACAAGACCTCCGGCGGCGTGCTGGTCAACGTCAAGGTCAACGGTAGGGTTAAGTGGAAAGTGGGGACTTGGGTCTCCGGAAGGTACCATATTTACGTCAACTGTCCCGCCTATATCAGACTCGCCGGAGACCGCGACGACGCCGCCCTCGGAGTTGCCGGACCCGCCGTCAAGTTTCAGCTTTTCCAAAATTGCGTCGttgatgtttag 666 0.6186 MTKECGYHDDHRRQLLRRALAALLGFIFLILLVIFLIWIILRPTKPRFVLEDATVYAFNLSSTGDTPSAAAPTPNTLTLTMQVTLSAFNPNNRIGIYYTKLDAYASYRGQQVSLATALPPTYQGHRDTAVWSPFLYGAAVPVSPFMLEILRQDKTSGGVLVNVKVNGRVKWKVGTWVSGRYHIYVNCPAYIRLAGDRDDAALGVAGPAVKFQLFQNCVVDV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00653 221 PANTHER OS05G0367900 PROTEIN 7 221 IPR044839 GO:0098542
Cca10g00653 221 Pfam Late embryogenesis abundant protein 84 187 IPR004864 -
Cca10g00653 221 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 7 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00653 Cca-Chr10 7158013 7159175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00653 13 187 EF-hand Containing Proteins AT5G21130 24.157 2.56e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00653 - - pvu:PHAVU_005G120900g 358.992
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00653 10 7158013 7159175 Cca10g00653 10 7158013 7159175 ECH
Cca10g00653 10 7158013 7159175 Cca04g00964 04 10254301 10255243 PCT