Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00964 ATGTCCATCAAGGAATGCGGGCACCACGAGGCGGAGCGCCGGCACGTGCTGCGGCTGATTCTGATCGGCGGCACCTCCTTCCTGGTGGTGATCCTCCTGACGATCCTCCTCATCTTCCTGATCCTCAGGCCCACGAAGCCCCACGTCATCCTCCAAGACGCGACCCTCTACAGCTTCAACCTCTCCAGTGCCACGCCCAACACGCTCTCCCTCACCATGCAAGTGACCCTCTCCAGCCACAACCCCAACGCCCGCATCGGCGTCTACTACCAACACCTCCGCCTCCACGCCGCCTACCGGAGCCAGCAGATCTCCCTCCCCACCGCCCTCCCCGACGCCTACCAGGGCCACCACGACTTCACCCTCTGGTCCCCCTTCCTCTACGCCGCCGCCGTCCCCGTCGCGCCCTTCCTCCTCGAAGCCCTCCGCCAGGACCAGCGCGCCGCCGCCCTCATGCTCAACGTCAGGCTCACCGGCGCCCTCAAGTGGAAGGTCGGCTCTTGGGTCTCCGGACGCTACCATCTTTATGTTAACTGCCCCGCCTTCATCAGCCTCGACGGAGACCGCGCCACCGCCGTCGGGGTCGTGGCTGCGCCGCTCAAGCTTCAGCTCTTGCAGAGTTGCAGTGTCGATGTCTAG 639 0.6541 MSIKECGHHEAERRHVLRLILIGGTSFLVVILLTILLIFLILRPTKPHVILQDATLYSFNLSSATPNTLSLTMQVTLSSHNPNARIGVYYQHLRLHAAYRSQQISLPTALPDAYQGHHDFTLWSPFLYAAAVPVAPFLLEALRQDQRAAALMLNVRLTGALKWKVGSWVSGRYHLYVNCPAFISLDGDRATAVGVVAAPLKLQLLQSCSVDV 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00964 212 Pfam Late embryogenesis abundant protein 76 179 IPR004864 -
Cca04g00964 212 PANTHER OS05G0367900 PROTEIN 5 212 IPR044839 GO:0098542
Cca04g00964 212 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 5 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00964 Cca-Chr4 10254301 10255243 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00964 - - gmx:100812905 303.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00964 04 10254301 10255243 Cca04g00964 04 10254301 10255243 ECH
Cca10g00653 10 7158013 7159175 Cca04g00964 04 10254301 10255243 PCT