Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00646 atGATGTCAGACATCACCACCGTCCACTCCGACATCATCCAATCCCACATCCTCACACGACTCGACGGCCCCGCCCTCGCCTCCGCCGCCTCCGCCACCGCCCACCTCCGCCGCCTCTGCACAGAGCACCACCTCTGGCGGAACATCTGCGCCGCCAACTGGCCCTCCCTCACCGACCCCTTCGCCGCCGCCCTCGTCGCCGCCTTCCCTGCCGGCCACCGCTCCCTCTTCTCCGACGCCTTCCCCGCCCTCCAGCACACCCCCAATCCCATCCCCGAGCCGGCGCCGGTGCCGCCGGAGGAGCTCTTGTCCGCCGTGGACATCTTGTACAAGGGCAAAAGCGTCCTTTCCCGCACCCTCCGAACCGAAACGCGGAAGGGGTGGTTCCTCTGCTCCCCTCTCTGGGTGGACCTCCTGGACCCCAACGAGGTGGTCCCCACAGCCCTCGTCTTCACGCAAAACGACGAAAGCCAATGGCTGAGCCACCTCCACCAGCACCTCTCCCTCAGCTGGATCATGATCCACCCCACCCGACACCGCGCCGCCAACCTCTCCAGCCGCCGCGCTGTGGGCGCCCGCCGCCACTGGCTGACCGGGGAGCTGGAGATTCTCTACGCCCTTCCCATGGACGATGTCCAGTGCGTGATCAAGGTGACGTGCTGCGGGAAGGTGGGTGGCGCCGTGCACGTGCGCGAGGTGAGCCTTACCATGGAGGACATCGAGGGAAGGCACGTGATGGGGAGGGAGGGCCTTGTCATTTTGCAGGACGCCATGGAGACCGGGAAGAGAGTGAAACCCGACGCCGAAGAAGCCGTTAGAAGGTTCGACAAGTTCTGCAGCTTGAGAAGAGAGAGGAAAGAGAGGAGAATGAAGCGAGACAAGGCCATGGACTTGTTGGCCATGTTGGTCGCTTTCTCTGTTTTCGCCACGCTCTTCTGCTTCATGGCATTCTCTGCTTGA 960 0.6396 MMSDITTVHSDIIQSHILTRLDGPALASAASATAHLRRLCTEHHLWRNICAANWPSLTDPFAAALVAAFPAGHRSLFSDAFPALQHTPNPIPEPAPVPPEELLSAVDILYKGKSVLSRTLRTETRKGWFLCSPLWVDLLDPNEVVPTALVFTQNDESQWLSHLHQHLSLSWIMIHPTRHRAANLSSRRAVGARRHWLTGELEILYALPMDDVQCVIKVTCCGKVGGAVHVREVSLTMEDIEGRHVMGREGLVILQDAMETGKRVKPDAEEAVRRFDKFCSLRRERKERRMKRDKAMDLLAMLVAFSVFATLFCFMAFSA 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00646 319 PANTHER F-BOX PROTEIN-RELATED 2 314 IPR045283 -
Cca10g00646 319 PANTHER F-BOX PLANT-LIKE PROTEIN 2 314 - -
Cca10g00646 319 SUPERFAMILY F-box domain 13 65 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00646 Cca-Chr10 7064041 7065479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00646 - - gmx:100781337 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00646 10 7064041 7065479 Cca10g00646 10 7064041 7065479 ECH
Cca10g00646 10 7064041 7065479 Cca04g00946 04 10045839 10047509 PCT