Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00641 ATGCCAATGAAGCCAATTCAGCTACCGGAGCCGCCCAGCCCCACGCCGCCCAGAGGCACTCCGGACATCTTCGAATCCGGCGTCCACACCATCGTCCGCCGCGCCGTCGTTATCGGCAACGGCTTCCCCTCCTCCGAGAATCACAGCATCGGTTTGCTCCGCGCCCTTGGCCTCTCCCACAACCACCTCCTATACCGCGTTACGAGGCCAAAAGGTGGAATCGACGCTTGGCTCCAATGGCTTCCCCTCTCTCTCCATAAAAAATTTCACTATCTATTTTCCGTGTTCCGCGCCTTCTCCTCCAAATCTCACTACCTGCCTATCACTTCGCACCCTAGCGGCTTGTCCGCTATTCTCGAAGCTGATGCCAAACACATCGTCAATTTGGCTCGCGAGACTTACGAAAAGGAGGGACCGTTGTTGGTGGTTGCATCTGGAAGGGACACAATCTCCGTTGCTAGTTCTATAAAACGTTTGGCTCCTGATCTTGTTTTTGTTGTTCAGATACAACATCCAAGGTCTCATTTGGATAGGTTTGACATGGTGATTACACCTCATCATGATTATTATCCTTTGACTCCAGAAGCACAGAGTCAGGTTCCTAAGTTTCTTAGAAGTTGGATAACTCCACGTGAGCCTCCAGATAGTCATGTGGTTCTGACCTTGGGAGCCTTACACCGAATAGATTTTGCTTCACTTCGCAGTGCTGCTCTTACATGGCAAGATGTGTTTGCACATGTTCCAAGGCCATTGCTCGTGGTCAACATTGGAGGACCAACAAAAAACTGTCGATATGGTGTTGATCTTGCAAAGCAGTTAGCAACATCTTTGCTCAGCGTTCTTGGTAGTTGTGGGAGTGTAAGAATATCCTTTTCAGAGAGGACTCCACAAAAGGTATCCAATATTATAGTGAAAGAACTTGGGAATAATCCAAAAGTTTATATTTGGGATGGGCAAGAACCAAACCCCCATATGGGGCATCTGGCTTGGGCTGATGCATTTGTTGTCACAGCAGATTCAGTTAGCATGATTAGTGAAGCTTGCAGCACCGGGAAGCCTGTGTATATTATGGGAGCTGAGCGATGCAGATGGAAGTTCACAGAATTCCACAAATCATTGAGACAACGGGGAGTTGTTAGGCCTTTTACAGGGTCTGAGGATATGTCGGAAAATTGGAGTTATCCACCCCTTGATGACAATGCTGAAGCAGCTAAACGGGTTCATGAAGCGCTTGCTGCCCGAGGGTGGAAACTGAAGATATAG 1263 0.4846 MPMKPIQLPEPPSPTPPRGTPDIFESGVHTIVRRAVVIGNGFPSSENHSIGLLRALGLSHNHLLYRVTRPKGGIDAWLQWLPLSLHKKFHYLFSVFRAFSSKSHYLPITSHPSGLSAILEADAKHIVNLARETYEKEGPLLVVASGRDTISVASSIKRLAPDLVFVVQIQHPRSHLDRFDMVITPHHDYYPLTPEAQSQVPKFLRSWITPREPPDSHVVLTLGALHRIDFASLRSAALTWQDVFAHVPRPLLVVNIGGPTKNCRYGVDLAKQLATSLLSVLGSCGSVRISFSERTPQKVSNIIVKELGNNPKVYIWDGQEPNPHMGHLAWADAFVVTADSVSMISEACSTGKPVYIMGAERCRWKFTEFHKSLRQRGVVRPFTGSEDMSENWSYPPLDDNAEAAKRVHEALAARGWKLKI 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00641 420 MobiDBLite consensus disorder prediction 1 19 - -
Cca10g00641 420 Pfam Mitochondrial fission ELM1 45 411 IPR009367 -
Cca10g00641 420 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 136 359 - -
Cca10g00641 420 MobiDBLite consensus disorder prediction 1 20 - -
Cca10g00641 420 PANTHER MITOCHONDRIAL FISSION PROTEIN ELM1 3 419 - -
Cca10g00641 420 PANTHER OS02G0535700 PROTEIN 3 419 IPR009367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00641 Cca-Chr10 6981463 6985500 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00641 - - gmx:100813086 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00641 10 6981463 6985500 Cca10g00641 10 6981463 6985500 ECH
Cca10g00641 10 6981463 6985500 Cca04g00940 04 9985885 9991228 PCT