Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00940 ATGAGACGAATTCAGCTTCCCGAGCCACCAAGCCCTACCGCACGGAGGAGCACTCCGGATATCTTCGAATCCGGAGTTCACACGTTCGTGAGGCGCGCCGTCGTCATCGGCAACGGTTCCGCCGCATCGGAGAATCAGAGCGTCGGATTGGTTCGCGCCCTTGGCCTCTCTGATAAGCAAATCTTATATCGTGTCACCAGGCCAAAAGGGGGAATTAATGAGTGGCTTCAATGGCTTCCAGTCTCTCTCCATAAAAAAATAGATTATATAGTAAGAATGATTCGCGGTTATTCTCAGCTTATGTTGAAATCTCAGGCAAAGAAGCTTATGCCTTTACCTTCAGAAAATGGTGTCAGTGCAGGCTTGTTAGCTGTCTTAGAAGCTGATGTAAAGCAGATAGTTAGTTTTGCTCGTGAAACTTATGAGAAGGAGGGACCTTTGTTGGTTGTCGCATGTGGGAGAGATACCATTTCTACTGCAAGTTCCATAAAACGTCTAGCTTCTGAGAATGTTTTTGTTGTTCAGATACAGCATCCAAGATTACATTTGAATAGGTTTGACATGGTGATTACGCCTAAGCATGATTATTATCCTTTGACACCAGAGGGACAGAAACAGGTTCCTCGTTTTCTTCAAAGTTGGATAACTCCTCGTGATCCTCCAGATTGTCATGTGGTTCTCACCATGGGAGCGCTACATCAAATAGATTTCACTTCAATACGTAGTGTTGCTGTTACTTGGCATGATGAGTTTGCGCATGTTCCAAGGCCTTTGCTTGTTGTCAACATTGGAGGACCAACGAGAAACTGTCGATATGGTGTAGACCTTGCCAAGCAGTTAGTAGCTTCTTTGCTCAGTGTTCTTGCTAGTTGTGGGAGTGTTAGGATATCCTTTTCAGAGAGGACTCCACAGAAGTTGTCCAATATTATAGTGAAAGAACTTGGGAATAATCCAAAAGTTTATATTTGGGATGGGCAAGGACCTAACCTGCATATGGGCCATTTAGCTTGGGCTGATGCATTTGTTGTCACAGCCGATTCCGTTAGCATGATAAGTGAAGCTTGCAGCACTGGGAAGCCTGTTTATGTCCTAGGAGCTGAGCGTTGCAGATGGAAGTACACTGAATTCCACAAATCATTGAGAGAGCTGGGAGTTGTTCGGCCTTTTACAGGTTCTGAGGATATATCAGAAAGTTGGAGTTATCCACCCCTTACCGATACTGCTGATGCCGCCAAAAAGGTTCATGAAGCGCTTGCTGCCCGAGGGTGGAAACTGAAGGTATAG 1284 0.4533 MRRIQLPEPPSPTARRSTPDIFESGVHTFVRRAVVIGNGSAASENQSVGLVRALGLSDKQILYRVTRPKGGINEWLQWLPVSLHKKIDYIVRMIRGYSQLMLKSQAKKLMPLPSENGVSAGLLAVLEADVKQIVSFARETYEKEGPLLVVACGRDTISTASSIKRLASENVFVVQIQHPRLHLNRFDMVITPKHDYYPLTPEGQKQVPRFLQSWITPRDPPDCHVVLTMGALHQIDFTSIRSVAVTWHDEFAHVPRPLLVVNIGGPTRNCRYGVDLAKQLVASLLSVLASCGSVRISFSERTPQKLSNIIVKELGNNPKVYIWDGQGPNLHMGHLAWADAFVVTADSVSMISEACSTGKPVYVLGAERCRWKYTEFHKSLRELGVVRPFTGSEDISESWSYPPLTDTADAAKKVHEALAARGWKLKV 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00940 427 PANTHER MITOCHONDRIAL FISSION PROTEIN ELM1 1 426 - -
Cca04g00940 427 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 137 367 - -
Cca04g00940 427 Pfam Mitochondrial fission ELM1 43 418 IPR009367 -
Cca04g00940 427 PANTHER OS02G0535700 PROTEIN 1 426 IPR009367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00940 Cca-Chr4 9985885 9991228 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00940 - - gmx:100777791 806.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00940 04 9985885 9991228 Cca04g00940 04 9985885 9991228 ECH
Cca10g00641 10 6981463 6985500 Cca04g00940 04 9985885 9991228 PCT