Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00636 ATGGATCTAAACGGCCCGACCCGATTCCGCAAACCCGCCCTCTCCTCCACGGAGCGCTTCCTCGGCGTCCCAACCCACGCGCCGCGCAACCAAAACCCTCCCTACCCCGCCCCCGCCACcgaagacgacgacgacgacctaatcgaagacgacgtcgttttctcccacaacgaccacgacTCCACCGAACcctcctcctcctcctcctcctccttttccatccCCAACCACCACAACCACCACCACAAGGCCTTCGCGTTCGGTCCTCCCGACGCCTTCGGCATCCTCGCCGCGCTGCCGGAGAACGACCACCTCTCCCCCAACGGCTCGCACCTCTTCCACCACAAACcctccgtctccgtttccctctcttcctcttcctcctcctcctcctcgcgccccatcccggccatccccaagcctccgccGGACCGGACTCCCTCCTCCTCCGTCAAGTTCCACCAGTCCGCGCCGGTGAACGTGCCGGTCATGCCGCAGCGGAGGCGCCGcgacttcgacgacgacgacggtggcgacgCGGTGGAGGATGAGGAGATGCTGCCGCCGCACGAGATTGTGGCGCGGAACGCGGCGCAGAGTCCGATGATGGCGTACTCGGTTCTCGAAGGAGTAGGAAGGACGCTGAAGGGAAGAGACTTGCGTCAGATGATATTTTAG 678 0.4572 MDLNGPTRFRKPALSSTERFLGVPTHAPRNQNPPYPAPATEDDDDDLIEDDVVFSHNDHDSTEPSSSSSSSFSIPNHHNHHHKAFAFGPPDAFGILAALPENDHLSPNGSHLFHHKPSVSVSLSSSSSSSSSRPIPAIPKPPPDRTPSSSVKFHQSAPVNVPVMPQRRRRDFDDDDGGDAVEDEEMLPPHEIVARNAAQSPMMAYSVLEGVGRTLKGRDLRQMIF 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00636 225 PANTHER EXPRESSED PROTEIN 4 222 - -
Cca10g00636 225 MobiDBLite consensus disorder prediction 107 185 - -
Cca10g00636 225 PANTHER - 4 222 - -
Cca10g00636 225 MobiDBLite consensus disorder prediction 59 75 - -
Cca10g00636 225 Pfam Senescence regulator 46 223 IPR007608 -
Cca10g00636 225 MobiDBLite consensus disorder prediction 1 77 - -
Cca10g00636 225 MobiDBLite consensus disorder prediction 113 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00636 Cca-Chr10 6942198 6944818 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00636 - - gmx:100778127 253.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00636 10 6942198 6944818 Cca04g00935 04 9948089 9949664 PCT