Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00935 ATGGGTCTCTCCGGTCCCAACCGAAAACTCTCCGCCACAGAGCGCTTCCTCGGTGTTCCATCTCACGCGCCGCCGCATTTCCCTTCCGTCGCCAACGACGACTTCCACGAGGACGACGTCGTTTTCTTCAGCGGTGACTACAGCGCCTCCACTCCTTCGTCTTCCACGTCCTCCTCTTCCTCCGCCACTCCTAACCACCTTATccaccaccaccaccaccaccacgacGGCATCCTCGCCGCGCTCCCCGAGAACGAAACCTCCCGCAACCTCCGGAACGTTTCGCAGCACTTTCACAAGGCGTCAATCTCCTCCATATCCTCCTCTTCCTCTCGCACCAATCCCTCCATTCCGCGGCCTCCGACGCCGGCGCAACCGTCGTCCGTCAATTTCCACCATTCCGCGCCCGTGAACGTCCCGATCTTGTCGATGAAGGCGCGCCGGCGGCACCTTGAGTTCgacgaagacgacgaggaggaggaagaagaggagATGATGCCTCCGCACGAAATCGTAGCGAGAAACTCATCGCAATCGCCAATGCTCGCTTGTTCGGTTCTGGAAGGGATAGGGAGAACGCTGAAAGGGAGGGACCTGCGTCAGGTTCGAAATGCCGTTTGGCGCCAAACAGACTAG 636 0.5409 MGLSGPNRKLSATERFLGVPSHAPPHFPSVANDDFHEDDVVFFSGDYSASTPSSSTSSSSSATPNHLIHHHHHHHDGILAALPENETSRNLRNVSQHFHKASISSISSSSSRTNPSIPRPPTPAQPSSVNFHHSAPVNVPILSMKARRRHLEFDEDDEEEEEEEMMPPHEIVARNSSQSPMLACSVLEGIGRTLKGRDLRQVRNAVWRQTD 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00935 211 MobiDBLite consensus disorder prediction 98 115 - -
Cca04g00935 211 PANTHER - 10 210 - -
Cca04g00935 211 MobiDBLite consensus disorder prediction 47 65 - -
Cca04g00935 211 MobiDBLite consensus disorder prediction 1 32 - -
Cca04g00935 211 MobiDBLite consensus disorder prediction 98 133 - -
Cca04g00935 211 Pfam Senescence regulator 34 210 IPR007608 -
Cca04g00935 211 MobiDBLite consensus disorder prediction 154 178 - -
Cca04g00935 211 MobiDBLite consensus disorder prediction 47 75 - -
Cca04g00935 211 PANTHER EXPRESSED PROTEIN 10 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00935 Cca-Chr4 9948089 9949664 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00935 - - gmx:102664814 253.447
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00636 10 6942198 6944818 Cca04g00935 04 9948089 9949664 PCT