Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00613 ATGGAATTGGAAAGCATAATACACTTCCTTCAAGATAAGACCATTTTAGTCACTGGTGCCACTGGCTTCCTTGCAAAAATTTTTGTGGAGAAAATATTGAGGGCTCAACCAAACGTGAAGAAACTTTATCTTCTTTTGAGAGCCAAAGATACTGAATCTGCTACTGAACGCTTACACAATGAGATAATAGGGAAGGACTTATTTAGATTGCTGAAGGAAAAGATGGGTACAAGTTTTGATTCCTTTGTCTCAGAAAAGTTGAATGTGATGCCTGGAGACATTTCTCAAGAGGACTTGAATTTGAAGGACTCCATTCTAGGGGAAGAGATCTATAATCAAACGGATGTTATAGTTAATTTGGCTGCAACAACCAAATTTGATGAAAGGTATATATACTCAAGGTGA 405 0.3704 MELESIIHFLQDKTILVTGATGFLAKIFVEKILRAQPNVKKLYLLLRAKDTESATERLHNEIIGKDLFRLLKEKMGTSFDSFVSEKLNVMPGDISQEDLNLKDSILGEEIYNQTDVIVNLAATTKFDERYIYSR 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00613 134 Gene3D - 7 134 - -
Cca10g00613 134 Pfam Male sterility protein 17 130 IPR013120 -
Cca10g00613 134 PANTHER FATTY ACYL-COA REDUCTASE 2 130 - -
Cca10g00613 134 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 129 IPR036291 -
Cca10g00613 134 PANTHER MALE STERILITY PROTEIN 2-RELATED 2 130 IPR026055 GO:0080019
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00613 Cca-Chr10 6686175 6686965 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00613 5 130 Acyl Lipid Metabolism Gene Families AT3G44540 59.055 3.72e-48 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00613 K13356 - gmx:100789566 227.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00613 10 6686175 6686965 Cca10g00613 10 6686175 6686965 ECH
Cca10g00613 10 6686175 6686965 Cca04g00905 04 9612603 9619806 PCT