Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00599 ATGCAGATCCAAAAAACTCTACTTGAGAACATCTCTTGGCCTTTTCCAAGTTTCTTCACTTGCTATAATTCTAGATTACTAACTATATCTCACCCTTGTTCTTCTTCTCTCCATTATATTTCTCCTCTAGCTGTTACTTCTGGTTTTCCTTCTCTTCCAGAAGCTAACTCACTCCTTCTTTACAACTGCACAAGCAGAAGAGACTCCATTCCATCATTTTTGGGAATTTGCAAAGGCTTACATAAATGTGGAGCTGCTGGTTCAACCTCTTATAGGATTCAAGAGCAAGAGAAAAATCCATATTCATGTTTAGTTATTGAAGATCTGCAAGAGGTTGACAAGGGCTTTCGTCCTCAACATTTGAATTGCTCTCATTACAGATTGGTGCATAGAAGTTCCTCAAAAGTTGAAGGTTATGAGTTGGGAATATGGGTGTCCTTTGATGTGCCAAATCATGTAGAAGATCTTTGTAAAGAGTGTGAAAAGCCTAATGGCAATTGTGGTGTTGGGTTGAAGTGTTTGTGCCATGCAAAAGAGTGCAGTGAGTGCCTAGATCTCTGA 561 0.3922 MQIQKTLLENISWPFPSFFTCYNSRLLTISHPCSSSLHYISPLAVTSGFPSLPEANSLLLYNCTSRRDSIPSFLGICKGLHKCGAAGSTSYRIQEQEKNPYSCLVIEDLQEVDKGFRPQHLNCSHYRLVHRSSSKVEGYELGIWVSFDVPNHVEDLCKECEKPNGNCGVGLKCLCHAKECSECLDL 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00599 186 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 20 181 - -
Cca10g00599 186 PANTHER PROTEIN, PUTATIVE-RELATED 20 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00599 Cca-Chr10 6557631 6558227 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00599 - - var:108333503 242.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00599 10 6557631 6558227 Cca10g00599 10 6557631 6558227 ECH
Cca10g00599 10 6557631 6558227 Cca04g00887 04 9367121 9368709 PCT