Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00887 ATGAACATGAATCCATTCAAGAAACTCCATCttcttcattctttactcttattcaatatcatattagtttattctACACCCCAACATGATCATGCAAACATCTGTGGGAACATCAAAACTCAAACACCTTTCTTGAACTCCAATTCTTCAATACTAGAAAGCATCACCCTTTGCATATCTCAGAATCTCTACTTGAGAACATCCCTTGGTCTTTTCCACGTTTCATCACTTGACTATAATGGTGGATTACTAACACTAACCATCACTCACTCTTCTTGTTCTTCTCTCCAATATGTTTCTCCTCTTGCTGTCACATCTGGTTTCCCTTCTCCTCCTGAGCCTAACTCACTTGTGCTCTTCAACTGCTCAAGCAGAAGAGACCCCTTTTTACCAATTATGCAAAATTGTAGGGCCTTATACAAATGTGGAGGTGCTGAAGAGAACATGAAACATCCTTGTTTAGTTGTTGAAGATCTTCAAAAAGTGAATAAGGATTTTCACCCTGAACAGATGAACTGCTCTCATTATAGTTGGGTACATAGAAGTGCTTCAGATGGTGGACATGATCAAGGATATAAGGTGGGAACAAGGATATCTGTTGACATTCCCCGTGTGCCAGAAATTTGTCAAGGGTGTGAAAAGCCTAATGGAAACTGTGGTGCTGGTTTGAATTGTTTATGCCACCCTAAAGAGTGCAAAGACAAGGTCATCTCCAAGGGTGGGATAAAATCTACTGCTAGTGTTTTTTTCTCTGTGCTCTCTTTCATTGGTTCTGTTACAGTAGCCTTCTTGATGCATCTCTAA 804 0.3843 MNMNPFKKLHLLHSLLLFNIILVYSTPQHDHANICGNIKTQTPFLNSNSSILESITLCISQNLYLRTSLGLFHVSSLDYNGGLLTLTITHSSCSSLQYVSPLAVTSGFPSPPEPNSLVLFNCSSRRDPFLPIMQNCRALYKCGGAEENMKHPCLVVEDLQKVNKDFHPEQMNCSHYSWVHRSASDGGHDQGYKVGTRISVDIPRVPEICQGCEKPNGNCGAGLNCLCHPKECKDKVISKGGIKSTASVFFSVLSFIGSVTVAFLMHL 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00887 267 PANTHER PROTEIN, PUTATIVE-RELATED 1 256 - -
Cca04g00887 267 PANTHER WALL-ASSOCIATED RECEPTOR KINASE CARBOXY-TERMINAL PROTEIN-RELATED 1 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00887 Cca-Chr4 9367121 9368709 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00887 - - gmx:121172633 445.662
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00887 04 9367121 9368709 Cca04g00887 04 9367121 9368709 ECH
Cca10g00599 10 6557631 6558227 Cca04g00887 04 9367121 9368709 PCT