Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00597 ATGAAAAACATGACAGACATAATATCATGTTTCAACGAAAACGCAGTGAGTGTGTCACACTCCTCATGTTCTAGCTACTCAAACAACGCTTGCATACCTCATAGTGCAACAACACCACCTTCAACTCAAAACACAGTTTCTTCGGTCTACAAAACAACCCTCTCCAACCAAAAGCAGCTTCTCATCACAGTCACGTGGTGCAAAACACACTCCTATCAAGGCCTCACCATAACCTTCGGAGACGACGGCCACGTGGCACCCTCTTTCAGACTCAACACCAGTTCAAGGTTCTTCCGCAAGAAGAAGGGAAGCAAGGTGGTGGAATTGGGAGACTCGAAGGTTGAAGTCTTTTGGGACCTTACAAAGGCCAAGTACAACACTGGACCCGAACCTGTTGAAGGGTTTTACGTGGCAATTCTTGTTGATGCAGAACTAGGCCTTATTCTGGGTCAAGAAAACAACAAGTTCAAAGAAAGAACACTTGTGAATAATGTGACACTTTTGTCACGGCGTGAGCATTGTTCTGGTAACGCGGTTTACGCCACGAAGGCTCAGTTTTGTGACAGTGGCACTTGGCATGACATTTTGATCAGATGCAGTGGGGAGAGTGAGGGGCTGAAGGCTCCTGTTTTGTCTGTTTGCATTGATAAGAAGACGGTGATTCGTGTGAAGAGGCTGCAGTGGAACTTTAGGGGGAATCAAACCATTTTTGTTGATGGGTTGCTGGTGGATTTGCTTTGGGATGTTCATAACTGGTTTTTCAATCCTGATTCTTCTGGCTATGCTGTGTTCATGTTCAGGACTAGGAGTGGCTTGGATAGCAGATTGTGGTTGGAGGAGAAGACGGTGCAGAAAGATAAAGATAGAGTTGAATTCTCCTTGTTGATCTATGCTTGTAAGAGTTCATAA 909 0.451 MKNMTDIISCFNENAVSVSHSSCSSYSNNACIPHSATTPPSTQNTVSSVYKTTLSNQKQLLITVTWCKTHSYQGLTITFGDDGHVAPSFRLNTSSRFFRKKKGSKVVELGDSKVEVFWDLTKAKYNTGPEPVEGFYVAILVDAELGLILGQENNKFKERTLVNNVTLLSRREHCSGNAVYATKAQFCDSGTWHDILIRCSGESEGLKAPVLSVCIDKKTVIRVKRLQWNFRGNQTIFVDGLLVDLLWDVHNWFFNPDSSGYAVFMFRTRSGLDSRLWLEEKTVQKDKDRVEFSLLIYACKSS 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00597 302 Pfam Plant protein of unknown function (DUF868) 41 300 IPR008586 -
Cca10g00597 302 PANTHER EXPRESSED PROTEIN 4 301 IPR008586 -
Cca10g00597 302 PANTHER DUF868 FAMILY PROTEIN 4 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00597 Cca-Chr10 6540494 6542039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00597 4 301 EF-hand Containing Proteins AT5G28150 37.705 1.54e-58 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00597 - - gmx:100798692 493.041
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00597 10 6540494 6542039 Cca10g00597 10 6540494 6542039 ECH
Cca10g00597 10 6540494 6542039 Cca04g00886 04 9357355 9358224 PCT