Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00557 ATGGACAACCAGCGTAGCCCTCTTTTAACTTGGGCTTACTACTTCCAGGGAAAGTCAATGGAGGAGCTGAGGCAGTCTCTCATATATACAACTCTGGAGCTAGAACAAACAAGAGCTGCAGTGCAAGATGAGCTCAGAAAGAGGGATGACCAACTACTCAACCTAAAGGACCTACTCAGCAAAACCATGAGAGAGAGAGATGAAGCACAAGAGAAATGCCAGAGATTTCTCTTGGAGAAGCTAGTTTTCcaacaacaacaacaacaaGTAGCAGCAGCTCCTGTGTCTGGAATTTCTAGCATTGAGGATGAGCCAAGAAGAGGAATTGACTCAAACAACGGCCTCTCATCATCAGATTGTGAAGAGAGCATTGTTTCCTCTCCAGTCATTGATCATTTGCCTCAACCTCAACCTCAGCCCCAATTGCCACAAGTCACACAATCCATGATTGAACTAACACCGGACAAGCCCTTACCAGAAAAGGGTAAGCTCCTACAAGCAGTGATGAAAGCTGGCCCTCTCCTGCAGACCCTCCTCCTAGCTGGACCTCTTCCTCAATGGAGACACCCTCCACCACCACTTGAGTCCTTTGAGATTCCCCCTGTcaccataccttcaccaccaccacaaccacaacttctccaccaAGATTCCTTTGTTAACGGTAGCAGCACCACAACCAACTGTGGAAGAGTTAGCAGAAAAAGGGTCTTCTCTGATGGCTCGGGTTCTCCTACTGAAACCAAGTACCAGAGGCTTGTACTTCACTGA 771 0.4397 MDNQRSPLLTWAYYFQGKSMEELRQSLIYTTLELEQTRAAVQDELRKRDDQLLNLKDLLSKTMRERDEAQEKCQRFLLEKLVFQQQQQQVAAAPVSGISSIEDEPRRGIDSNNGLSSSDCEESIVSSPVIDHLPQPQPQPQLPQVTQSMIELTPDKPLPEKGKLLQAVMKAGPLLQTLLLAGPLPQWRHPPPPLESFEIPPVTIPSPPPQPQLLHQDSFVNGSSTTTNCGRVSRKRVFSDGSGSPTETKYQRLVLH 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00557 256 MobiDBLite consensus disorder prediction 93 123 - -
Cca10g00557 256 MobiDBLite consensus disorder prediction 217 249 - -
Cca10g00557 256 Coils Coil 52 79 - -
Cca10g00557 256 Pfam Protein of unknown function (DUF1635) 18 253 IPR012862 -
Cca10g00557 256 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 1 256 - -
Cca10g00557 256 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 1 256 IPR012862 -
Cca10g00557 256 MobiDBLite consensus disorder prediction 217 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00557 Cca-Chr10 6052029 6053829 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00557 - - gmx:100806513 382.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00557 10 6052029 6053829 Cca10g00557 10 6052029 6053829 ECH
Cca10g00557 10 6052029 6053829 Cca04g00842 04 8750464 8751726 PCT