Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca04g00842 | ATGAATTACATGGAACGCACTCCTCTTATGAATTGGGCTTACTACTGCCACGGAAAGTCAATGGAGGAGCTGAAGCAGTCCCTGATGTACGCAACTGTTGAGCTGGAAGAAACGAGAGCGAGTGTGGAAGAGGAGCTGAGAAAGAGGGACGAAGAGCTGGTGAGGCTGAAGGAGGTTCTGAGGAAAGTGATGAGAGAAAGGGACGAAGCAAAAGAGAAATGGCAGAGGCTGGTTATTCCTCCAGGGTCAGGGGTTTCAAGCATTGAGGATGAGCCCAGAAGAGATGGCCTCTCAATCTCATCGTCGGATTGCGAGGAGAGCATTGTTTCCTCTCCGCTCCATGGGGGCCCCATGATATCAACAGACAAACCGTTGCCAGAAAAGGGTAAGCTTTTGCAAGCAGTCATGAAAGCAGGTCCTCTCCTGCAGACACTGCTTCTTGCAGGACCACTTCCTCAATGGAGACACCCTCCGCCCCCTCTCGAGTCCTTTCAGATTCCACCTGTCACCATTCCTTCACACCCACAACCCCAAGATTCCAACTGCAGGAAGAGGCTTTTCTCTCAGCCCCCTCATTCTCCCTCGCAGACCAAGTATCAAAGGATTCTACTCCACTGA | 618 | 0.5146 | MNYMERTPLMNWAYYCHGKSMEELKQSLMYATVELEETRASVEEELRKRDEELVRLKEVLRKVMRERDEAKEKWQRLVIPPGSGVSSIEDEPRRDGLSISSSDCEESIVSSPLHGGPMISTDKPLPEKGKLLQAVMKAGPLLQTLLLAGPLPQWRHPPPPLESFQIPPVTIPSHPQPQDSNCRKRLFSQPPHSPSQTKYQRILLH | 205 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca04g00842 | 205 | MobiDBLite | consensus disorder prediction | 175 | 205 | - | - | |
| Cca04g00842 | 205 | PANTHER | ENABLED-LIKE PROTEIN (DUF1635) | 10 | 195 | - | - | |
| Cca04g00842 | 205 | MobiDBLite | consensus disorder prediction | 158 | 174 | - | - | |
| Cca04g00842 | 205 | MobiDBLite | consensus disorder prediction | 158 | 205 | - | - | |
| Cca04g00842 | 205 | Coils | Coil | 32 | 73 | - | - | |
| Cca04g00842 | 205 | MobiDBLite | consensus disorder prediction | 81 | 125 | - | - | |
| Cca04g00842 | 205 | Pfam | Protein of unknown function (DUF1635) | 19 | 202 | IPR012862 | - | |
| Cca04g00842 | 205 | PANTHER | ENABLED-LIKE PROTEIN (DUF1635) | 10 | 195 | IPR012862 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Cca04g00842 | Cca-Chr4 | 8750464 | 8751726 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca04g00842 | - | - | gmx:100782615 | 270.396 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Cca04g00842 | 04 | 8750464 | 8751726 | Cca04g00842 | 04 | 8750464 | 8751726 | ECH | |
| Cca10g00557 | 10 | 6052029 | 6053829 | Cca04g00842 | 04 | 8750464 | 8751726 | PCT |