Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00519 ATGAGTTCAGGGGATCATGAGTCTCCAATCCGACTCCAATTGCCTCCCCTCTCCCCGAGCCTCTTCGATGTCGAACCGTCCGACCTACACCAACCCAACGGATCCGCCGCCTCAAGCCCTACCAGCAGCGGTTACGCCGCCGAGCGCGGAAGCAGCACCGCCACCAGCGCCTCCCACGCCGAAGAGCTCCCTCACCACGAAATCGAGGAGATGTCCATCCACGATTCCCAACCCCTCTCGAGCCCCACCTGGCTCCCCGGAAAACGACACGCCGATGAGGATGATGCTTCCATTTCATGGAGGAAAAGGAAGAAGCATTTTTTTGTTCTAAGTCATTCTGGTAAACCAATATATTCTAGGTACGGAGATGAACACAAGCTTGCTGGTTTTTCAGCAACTTTGCAAGCAATCATTTCCTTTGTGGAGAATGGGGGTGACCATGTCAAATTGGTGAGGGCTGGAAAGCATCAGGTGGTTTTTCTTGTAAAAGGACCAATTTACTTAGTCTGCATCAGTTGCACAGAAGCGCCTTATGAGTCACTTAAGGGGCAGTTGGAGCTTATACATGGCCAGATGATCGTTATACTAACAAAGTCAGTAAACAGATGTTTTGAGAAGAATCCAAAGTTTGATATGACACCTTTGCTTGGTGGAACAGACACTGTCTTCTCTTCACTAATCCACTCTTTTAGCTGGAATCCAGCTACATTTCTTCACGCCTATACATGCCTACCTCTTTCATATGCAACAAGGCAAGCTGCTGGTGCTATCTTGCAAGACGTTGCTGATTCTGGTGTTCTGTTTGCAATTCTGATGTGCAGACACAAGGTAATCAGTTTAGTTGGTGCTCAGAAGGCCTCTCTTCATCCAGATGATATGTTGCTCTTGGCCAACTTTGTTATGTCAACAGAATCCTTTAGGACTTCAGAAGCATTTTCTCCCATTTGCTTGCCAAGATACAATGCTTTGGCATTTTTGTATGCCTATATTCACTATTTTGATGATGACACATACTTGATGTTGCTGACCACGAGTTCTGATGCATTTTACCATCTTAAGGATTGCAGGATTCATATCGAAACGGTCCTTTTGAAGTCAAATGTCCTTAGTGAAGTTCAGAGATCTTTGCTTGATGGTGGGATGCGTGTTGAAGATCTACCATCCATACCTCGTTTTGGATCGTCTCCTCGTTTGAGCCAGCATAGGCTTCCATCAGATTCCCCTGAAGGATTGAGGGAACCTGATTGTGGCTATGGCGGTGCTGCTGGGTTGTGGCATTTCATATATCGCAGCATTTATCTGGACCAATATATATCTTCAGAGTTCTCCTCACCTATTAACACTCCTAAGCAGCAGAAAAGACTGTATAGGGATTACCAGAAGCTTTTTGCATCCATGCATGACAAAGGAATTGGACCACACAAAACACAGTTTAGAAGGGACGAAAACTACGGTAACAAATATTTTGATTCATGCTTTGTGGTCATGATACATCCAAGAGATAGATATGTGATATTTTGA 1521 0.453 MSSGDHESPIRLQLPPLSPSLFDVEPSDLHQPNGSAASSPTSSGYAAERGSSTATSASHAEELPHHEIEEMSIHDSQPLSSPTWLPGKRHADEDDASISWRKRKKHFFVLSHSGKPIYSRYGDEHKLAGFSATLQAIISFVENGGDHVKLVRAGKHQVVFLVKGPIYLVCISCTEAPYESLKGQLELIHGQMIVILTKSVNRCFEKNPKFDMTPLLGGTDTVFSSLIHSFSWNPATFLHAYTCLPLSYATRQAAGAILQDVADSGVLFAILMCRHKVISLVGAQKASLHPDDMLLLANFVMSTESFRTSEAFSPICLPRYNALAFLYAYIHYFDDDTYLMLLTTSSDAFYHLKDCRIHIETVLLKSNVLSEVQRSLLDGGMRVEDLPSIPRFGSSPRLSQHRLPSDSPEGLREPDCGYGGAAGLWHFIYRSIYLDQYISSEFSSPINTPKQQKRLYRDYQKLFASMHDKGIGPHKTQFRRDENYGNKYFDSCFVVMIHPRDRYVIF 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00519 506 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 157 171 IPR004353 GO:0006623
Cca10g00519 506 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 105 122 IPR004353 GO:0006623
Cca10g00519 506 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 261 274 IPR004353 GO:0006623
Cca10g00519 506 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 285 301 IPR004353 GO:0006623
Cca10g00519 506 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 310 333 IPR004353 GO:0006623
Cca10g00519 506 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 208 220 IPR004353 GO:0006623
Cca10g00519 506 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 123 143 IPR004353 GO:0006623
Cca10g00519 506 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 237 258 IPR004353 GO:0006623
Cca10g00519 506 PRINTS Saccharomyces cerevisiae 73.5kDa hypothetical protein signature 338 364 IPR004353 GO:0006623
Cca10g00519 506 MobiDBLite consensus disorder prediction 391 411 - -
Cca10g00519 506 MobiDBLite consensus disorder prediction 1 90 - -
Cca10g00519 506 Pfam Second Longin domain of FUZ, MON1 and HPS1 266 356 IPR043971 GO:0016192
Cca10g00519 506 Pfam First Longin domain of FUZ, MON1 and HPS1 105 226 IPR043972 GO:0016192
Cca10g00519 506 PANTHER BNAC04G15860D PROTEIN 37 485 - -
Cca10g00519 506 MobiDBLite consensus disorder prediction 31 59 - -
Cca10g00519 506 PANTHER SAND PROTEIN-RELATED 37 485 IPR004353 GO:0006623
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00519 Cca-Chr10 5465965 5471597 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00519 K20195 - gmx:100816794 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00519 10 5465965 5471597 Cca10g00519 10 5465965 5471597 ECH
Cca10g00519 10 5465965 5471597 Cca04g00792 04 7866362 7873532 PCT