Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00518 ATGGAAGCCAAGTGGATCATAAGGAGGCCTCACACGTGTCCCTTGCCCTCGTTCCTCGAGGCTCGAGCCAACTCAGTACCAACAACAGGGCTTTCGGAAAGGAACTTCAATGTTCAAACACCACAACTAAATTTTCTTTATCGCATGGCCACCAACATTCCTAGACCACCCTATCGCTTTCTCCCTCCCATGGATGCAGATTCCATCTCCGATTCCACCTTCGAATTCCACGAATCCGATCTCTACGCCTCCTCCGCCACCGCTAACTCTCCCGAATTCTGCAAATCCGTTCGGGCCTCCAGGTTCCGCGGCAGAtcctcctcctcctcctcctcctcctcctccGCCGCCGCACGCGCCTCTGCTCCGGCCTCGCTTCCGGTGAACGTGCCGGACTGGTCCAAGATTCTCGGCGACGAGTACGGACAGAGCCggaggaggaaccgcgacgaggaggaggcgcagagcgaggaggaggaggaggaggGATGCGGGAGAGTGCCTCCGCACGAGTTTCTGGCGAAGACGAGAATAGCGTCGTTCTCGGTGCACGAAGGAGTTGGGAGGACGCTGAAAGGACGCGATCTGAGTAGGGTGCGAAACGCGATTTGGGCGAAAACGGGATTCCAGGACTAG 636 0.4921 MEAKWIIRRPHTCPLPSFLEARANSVPTTGLSERNFNVQTPQLNFLYRMATNIPRPPYRFLPPMDADSISDSTFEFHESDLYASSATANSPEFCKSVRASRFRGRSSSSSSSSSSAAARASAPASLPVNVPDWSKILGDEYGQSRRRNRDEEEAQSEEEEEEGCGRVPPHEFLAKTRIASFSVHEGVGRTLKGRDLSRVRNAIWAKTGFQD 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00518 211 PANTHER EMB|CAB72159.1 53 211 - -
Cca10g00518 211 MobiDBLite consensus disorder prediction 139 153 - -
Cca10g00518 211 MobiDBLite consensus disorder prediction 104 120 - -
Cca10g00518 211 PANTHER EMB|CAB72159.1 53 211 - -
Cca10g00518 211 MobiDBLite consensus disorder prediction 104 124 - -
Cca10g00518 211 MobiDBLite consensus disorder prediction 137 169 - -
Cca10g00518 211 Pfam Senescence regulator 88 211 IPR007608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00518 Cca-Chr10 5462841 5463614 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00518 - - gmx:100814909 211.846
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00518 10 5462841 5463614 Cca10g00518 10 5462841 5463614 ECH
Cca10g00518 10 5462841 5463614 Cca04g00790 04 7845920 7846597 PCT