Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00790 ATGGCCACCAGAAAAACCTACTTCGCCGCACGGAGCCACCGTTTCCTCCCCGTAGCTCCAGACACGGACTCTCTTTCCCTTTCCGTGgattccgattccgattccgcgttcgagttccacgagtccgaGATTTACGACTCGGGCCGGGCCAACTCGTTCGAGTGCCGCGGATCGTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTCCCTTTCCGTGgattccgattccgattccgcgttcgagttccacgagtccgaGATTTACGACTCGGGCCGGGCCAACTCGTTCGAGTGCCGCGGATCGTTACATGGTCGCGCCTCTGGCTTCGCCAAGAAAAAGGGGTCTCCCACCACCGCTCCGGCGTCGGTGCCGGTGAACATCCCCGACTGGTCGAAGATCCTCGGCGGCGAGTATCACCGGCGGAGGAACAGCGACGAGGAGAACGAGGAGAACAGTGTGAGGGTGCCACCGCATGAGTTCCTAGCGAGGACGAGGGTGGCTTCGTTTTCCGTGCACGAGGGTGTTGGGAGGACCCTCAAGGGAAGGGATCTCAGCACACTCCGAAACGCCATTTGGGCCAAAACCGGTTTCCAAGACTGA 678 0.441 MATRKTYFAARSHRFLPVAPDTDSLSLSVDSDSDSAFEFHESEIYDSGRANSFECRGSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLSVDSDSDSAFEFHESEIYDSGRANSFECRGSLHGRASGFAKKKGSPTTAPASVPVNIPDWSKILGGEYHRRRNSDEENEENSVRVPPHEFLARTRVASFSVHEGVGRTLKGRDLSTLRNAIWAKTGFQD 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00790 225 MobiDBLite consensus disorder prediction 133 152 - -
Cca04g00790 225 PANTHER SENESCENCE REGULATOR S40-RELATED 97 225 - -
Cca04g00790 225 PANTHER EMB|CAB72159.1 97 225 - -
Cca04g00790 225 Coils Coil 59 59 - -
Cca04g00790 225 Pfam Senescence regulator 131 225 IPR007608 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00790 Cca-Chr4 7845920 7846597 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00790 - - gmx:100812183 177.563
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00790 04 7845920 7846597 Cca04g00790 04 7845920 7846597 ECH
Cca10g00518 10 5462841 5463614 Cca04g00790 04 7845920 7846597 PCT