Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00469 ATGTCGACAATGTTGTCGATCTTCCGTCAATACACCTACGACGACTCGTTCGAGCAAGTGTTCGTGTCGGGAAAAATTCTAAAGCAATACCAAATCGCGCTGACCTTCGCGACCGATTACGACGAGAAAGACGCCCCCACTAATGGGGTCTTCAGGCCCACCTGGGACCAGACGAAGGTGAGCCTGGACTCCATCATGCACTTCAAGCAGCAGCACAAGGACGTGGAAGTGAAAGTGTTCATCTCCATAGGTAACCGCGGCCCAATCTACCCCTTCAAGCCCCTGGACACCAAAACATGGGCCTCCAACGCCACCGCCTCCCTCACCCCCATCATCCAAAGCCTCCAAGTCGACGGCATCGACGTGCTGTACGAGCACATCGATGCCTCCCCCGGTGACTTTATCAAGTGCGTGGGACAGCTGATAAGGAACCTGAAGGAGCAGCGGCTGGTGACGCTAGCTTCCATTTCTCCCTCCTCCGCTCTCGACCACGAGTTCTACTCCACGCTCTACAACGACGTCTCGCTTTACGTTGACTGGGTTGACTACCAGTTCCAGAACGAGGTTGGCCCAGTCTACGACCCCACCACGTTGGTTCAGCGCTACAATCATCTCGCCAAGGATGTTTATCCGAGGAAGAAGCTCTTTGCTGGCTACAGCGCTGAGAACGAGGACTGGGCCACCTTGTCCCCCATCGTCTTCTTCCTTGCTGGAATCGACATTCTCAAGAAGAAACGAGCCCCTGGCATTTCCATTCATTACCATAATTACTATTCGCAACCCCCCTCTACCTAG 795 0.5421 MSTMLSIFRQYTYDDSFEQVFVSGKILKQYQIALTFATDYDEKDAPTNGVFRPTWDQTKVSLDSIMHFKQQHKDVEVKVFISIGNRGPIYPFKPLDTKTWASNATASLTPIIQSLQVDGIDVLYEHIDASPGDFIKCVGQLIRNLKEQRLVTLASISPSSALDHEFYSTLYNDVSLYVDWVDYQFQNEVGPVYDPTTLVQRYNHLAKDVYPRKKLFAGYSAENEDWATLSPIVFFLAGIDILKKKRAPGISIHYHNYYSQPPST 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00469 264 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 1 264 IPR001223 GO:0005975
Cca10g00469 264 PANTHER RUBISCO-ASSOCIATED PROTEIN 3 260 - -
Cca10g00469 264 PANTHER CHITINASE 2-LIKE 3 260 - -
Cca10g00469 264 Pfam Glycosyl hydrolases family 18 62 231 IPR001223 GO:0005975
Cca10g00469 264 Gene3D Glycosidases 5 262 - -
Cca10g00469 264 SUPERFAMILY (Trans)glycosidases 32 253 IPR017853 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00469 - - gmx:100776259 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00469 10 4819916 4821125 Cca10g00469 10 4819916 4821125 ECH
Cca10g00469 10 4819916 4821125 Cca04g00710 04 7021864 7022968 PCT