Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca10g00464 ATGATTGATTGGAGAAATATTGGTTTGTTTATCTGTGCTTTATCAATCTTGCCCCTTGTATGCTTTTGTGCCACCTTTGTTCCAGAAGATAATTATCTTATAGATTGTGGTGCACCTGCGACTACTTCAGTAGGTAGGCGCAATTTCACATCGGATAGTTCATCCAAGGGTCTCCTCTCCACACAAGATCATATTCTTGCCACTACCAGCTTAAAATTAAACACTTCCTCTGATGATTCACCTCTCTATAAAACCGCGAGAATCTTCACTGGATCCTCAAAGTATACTTTTCCAATTAAGCAAAGGGGGAGACACTGGATCCGTCTCTATTTCTTCCCTTCCAATTATGAAAAATACAATTTGAGTGTTACAAATTTCACTGTTGCAACTCAAGACCATGTCCTTTTCAGTAGCCTCAACATGCAGAAAGATCCTGTCATGAAGGAGTACTCAGTGAATGTGACCTCAGACACCCTTGTTGTGACCTTTACCCCTTCACAAAATTCCACTGCTTTTGTGAATGCCATTGAAGTTGTTTCTGCCCCTGATGACCTAATTGGTGATGATGCTTCCGTGTTAGACCCATCAGAAGCCTATTCTGGGTTGGTCACACAGGCACTGGAGACAGTTTGGAGGATTAACATGGGTGGTCCAGTTGTGACCCCTATGAATGACACCCTTCAAAGAACTTGGATTCCAGATCAAAGGTTTCTTTTGGAGCCCAACCTTGCCTCATTTTTTTCTAATATTGATGCTGTTCAGTATGAGAAAGGAGGGATAGCAACAGAAAACACTGCTCCCCCTACTGTTTATGGATTTCAGTACCTTGTTCGGCTTCACTTCTGTGATGTAGTCAGTAAAAGCCTCAATGAACTCTACTTCAATGTTTATATTAACTCCAAGCTGGCTCTCTCCAATGTTGATCTCAGTGTTTATAGCAATAATGTCTTGGGTGTTCCATATTTTAAAGATTTGGTTACACCCTTGGCTGACAAGAATACGCTTCGCCTAAGTATTGGCCCTTCTGATTCAAGCATGGGAAATTTTCCTAATGCCATTTTGAATGGGCTGGAGATCATGAAAATGAACAATTCTATGGGCGGTCTTATTGGAGGAGCAGCATCTGTGGCTATTACTTCTGGTTCAAGTTCTAAGAAAATTGGCGTGATTGTGGGTATGATTGTTGGGGTAGTTGTTGCAGTTGTCTTGGCTGGAGTTTTCTTTGTACTATGCAGGAAAAGAAGAAGGTTGGCTCAAAGGCAGTCAAAGACATGGGTTCCTTTATCTGTCAATGATGGAACTACTTCTCATACCATGGGAAGTAAATATTCTAATGGCACAACACTAAGTGCTGCTTCAAACTTTGAGTACCGTGTCCCATTTTTGGCGGTTCAGGAAgctacaaacaactttgatgagagttgggttattgggataggcaaaatcagaccagattctctgagaaagtttggagaaactgctgagaaatgcttggctgactatggtgttgacaggccttctatggGAGATGTCTTGTGGAATTTGGAGTATGCTCTCCAACTTCAGGAGGCTGTGGTTCAAGGTGATCCTGAAGAAAACAGCACCAATATGATTGGTGAACTATCTCCACGGGTCAACAATTTCAATCAGGATGCAAGTGCTTCTGTAACTGTTCCGCCCTTTGAAGGCTCAAGTGTGGATGATCTGTCTGGTGTTTCTATGAGTAGGGTGTTCTCACAGTTGGTGAAATCTGAGGGTAGATAG 1764 0.3906 MIDWRNIGLFICALSILPLVCFCATFVPEDNYLIDCGAPATTSVGRRNFTSDSSSKGLLSTQDHILATTSLKLNTSSDDSPLYKTARIFTGSSKYTFPIKQRGRHWIRLYFFPSNYEKYNLSVTNFTVATQDHVLFSSLNMQKDPVMKEYSVNVTSDTLVVTFTPSQNSTAFVNAIEVVSAPDDLIGDDASVLDPSEAYSGLVTQALETVWRINMGGPVVTPMNDTLQRTWIPDQRFLLEPNLASFFSNIDAVQYEKGGIATENTAPPTVYGFQYLVRLHFCDVVSKSLNELYFNVYINSKLALSNVDLSVYSNNVLGVPYFKDLVTPLADKNTLRLSIGPSDSSMGNFPNAILNGLEIMKMNNSMGGLIGGAASVAITSGSSSKKIGVIVGMIVGVVVAVVLAGVFFVLCRKRRRLAQRQSKTWVPLSVNDGTTSHTMGSKYSNGTTLSAASNFEYRVPFLAVQEATNNFDESWVIGIGKIRPDSLRKFGETAEKCLADYGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGELSPRVNNFNQDASASVTVPPFEGSSVDDLSGVSMSRVFSQLVKSEGR 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca10g00464 587 Gene3D - 29 182 - -
Cca10g00464 587 Gene3D - 205 364 - -
Cca10g00464 587 PANTHER OS07G0166700 PROTEIN 19 272 IPR045272 GO:0004714|GO:0006468
Cca10g00464 587 Pfam Malectin-like domain 34 362 IPR024788 -
Cca10g00464 587 PANTHER OS07G0166700 PROTEIN 480 576 IPR045272 GO:0004714|GO:0006468
Cca10g00464 587 PANTHER OS07G0166700 PROTEIN 272 480 IPR045272 GO:0004714|GO:0006468
Cca10g00464 587 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 19 272 - -
Cca10g00464 587 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 480 576 - -
Cca10g00464 587 PANTHER RECEPTOR-LIKE PROTEIN KINASE THESEUS 1 272 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca10g00464 Cca-Chr10 4771137 4773656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca10g00464 480 587 Receptor kinase-like Gene Family AT3G46290 78.571 8.67e-49 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca10g00464 - - gmx:100778698 895.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca10g00464 10 4771137 4773656 Cca10g00464 10 4771137 4773656 ECH
Cca10g00464 10 4771137 4773656 Cca04g00708 04 6978732 6981807 ECH
Cca10g00464 10 4771137 4773656 Cca04g00708 04 6978732 6981807 PCT